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CHRONOS: a time-varying method for microRNA-mediated subpathway enrichment analysis.
Bioinformatics. 2016 Mar 15;32(6):884-92. doi: 10.1093/bioinformatics/btv673. Epub 2015 Nov 14.
Bioinformatics. 2016.
PMID: 26568631
DEsubs: an R package for flexible identification of differentially expressed subpathways using RNA-seq experiments.
Vrahatis AG, Balomenos P, Tsakalidis AK, Bezerianos A.
Vrahatis AG, et al. Among authors: balomenos p.
Bioinformatics. 2016 Dec 15;32(24):3844-3846. doi: 10.1093/bioinformatics/btw544. Epub 2016 Aug 19.
Bioinformatics. 2016.
PMID: 27542770
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Identifying disease network perturbations through regression on gene expression and pathway topology analysis.
Dimitrakopoulos GN, Balomenos P, Vrahatis AG, Sgarbas K, Bezerianos A.
Dimitrakopoulos GN, et al. Among authors: balomenos p.
Annu Int Conf IEEE Eng Med Biol Soc. 2016 Aug;2016:5969-5972. doi: 10.1109/EMBC.2016.7592088.
Annu Int Conf IEEE Eng Med Biol Soc. 2016.
PMID: 28269612
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Identification of differentially expressed subpathways via a bilevel consensus scoring of network topology and gene expression.
Balomenos P, Dragomir A, Tsakalidis AK, Bezerianos A.
Balomenos P, et al.
Annu Int Conf IEEE Eng Med Biol Soc. 2020 Jul;2020:5316-5319. doi: 10.1109/EMBC44109.2020.9176556.
Annu Int Conf IEEE Eng Med Biol Soc. 2020.
PMID: 33019184
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