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The best of both worlds: Combining lineage-specific and universal bait sets in target-enrichment hybridization reactions.
Hendriks KP, Mandáková T, Hay NM, Ly E, Hooft van Huysduynen A, Tamrakar R, Thomas SK, Toro-Núñez O, Pires JC, Nikolov LA, Koch MA, Windham MD, Lysak MA, Forest F, Mummenhoff K, Baker WJ, Lens F, Bailey CD. Hendriks KP, et al. Among authors: baker wj. Appl Plant Sci. 2021 Jul 7;9(7):10.1002/aps3.11438. doi: 10.1002/aps3.11438. eCollection 2021 Jul. Appl Plant Sci. 2021. PMID: 34336398 Free PMC article.
New targets acquired: Improving locus recovery from the Angiosperms353 probe set.
McLay TGB, Birch JL, Gunn BF, Ning W, Tate JA, Nauheimer L, Joyce EM, Simpson L, Schmidt-Lebuhn AN, Baker WJ, Forest F, Jackson CJ. McLay TGB, et al. Among authors: baker wj. Appl Plant Sci. 2021 Jun 14;9(7):10.1002/aps3.11420. doi: 10.1002/aps3.11420. eCollection 2021 Jul. Appl Plant Sci. 2021. PMID: 34336399 Free PMC article.
Factors Affecting Targeted Sequencing of 353 Nuclear Genes From Herbarium Specimens Spanning the Diversity of Angiosperms.
Brewer GE, Clarkson JJ, Maurin O, Zuntini AR, Barber V, Bellot S, Biggs N, Cowan RS, Davies NMJ, Dodsworth S, Edwards SL, Eiserhardt WL, Epitawalage N, Frisby S, Grall A, Kersey PJ, Pokorny L, Leitch IJ, Forest F, Baker WJ. Brewer GE, et al. Among authors: baker wj. Front Plant Sci. 2019 Sep 18;10:1102. doi: 10.3389/fpls.2019.01102. eCollection 2019. Front Plant Sci. 2019. PMID: 31620145 Free PMC article.
A nuclear phylogenomic study of the angiosperm order Myrtales, exploring the potential and limitations of the universal Angiosperms353 probe set.
Maurin O, Anest A, Bellot S, Biffin E, Brewer G, Charles-Dominique T, Cowan RS, Dodsworth S, Epitawalage N, Gallego B, Giaretta A, Goldenberg R, Gonçalves DJP, Graham S, Hoch P, Mazine F, Low YW, McGinnie C, Michelangeli FA, Morris S, Penneys DS, Pérez Escobar OA, Pillon Y, Pokorny L, Shimizu G, Staggemeier VG, Thornhill AH, Tomlinson KW, Turner IM, Vasconcelos T, Wilson PG, Zuntini AR, Baker WJ, Forest F, Lucas E. Maurin O, et al. Among authors: baker wj. Am J Bot. 2021 Jul;108(7):1087-1111. doi: 10.1002/ajb2.1699. Epub 2021 Jul 23. Am J Bot. 2021. PMID: 34297852 Free article.
A Universal Probe Set for Targeted Sequencing of 353 Nuclear Genes from Any Flowering Plant Designed Using k-Medoids Clustering.
Johnson MG, Pokorny L, Dodsworth S, Botigué LR, Cowan RS, Devault A, Eiserhardt WL, Epitawalage N, Forest F, Kim JT, Leebens-Mack JH, Leitch IJ, Maurin O, Soltis DE, Soltis PS, Wong GK, Baker WJ, Wickett NJ. Johnson MG, et al. Among authors: baker wj. Syst Biol. 2019 Jul 1;68(4):594-606. doi: 10.1093/sysbio/syy086. Syst Biol. 2019. PMID: 30535394 Free PMC article.
201 results