Baker SE - Search Results

1

Itaconic acid production is regulated by LaeA in Aspergillus pseudoterreus.

Pomraning KR, Dai Z, Munoz N, Kim YM, Gao Y, Deng S, Lemmon T, Swita MS, Zucker JD, Kim J, Mondo SJ, Panisko E, Burnet MC, Webb-Robertson BM, Hofstad B, Baker SE, Burnum-Johnson KE, Magnuson JK; Agile BioFoundry. Pomraning KR, et al. Among authors: baker se. Metab Eng Commun. 2022 Aug 24;15:e00203. doi: 10.1016/j.mec.2022.e00203. eCollection 2022 Dec. Metab Eng Commun. 2022. PMID: 36065328 Free PMC article.

2

Mixed-effects statistical model for comparative LC-MS proteomics studies.

Daly DS, Anderson KK, Panisko EA, Purvine SO, Fang R, Monroe ME, Baker SE. Daly DS, et al. Among authors: baker se. J Proteome Res. 2008 Mar;7(3):1209-17. doi: 10.1021/pr070441i. Epub 2008 Feb 6. J Proteome Res. 2008. PMID: 18251496

3

Proteomics for validation of automated gene model predictions.

Zhou K, Panisko EA, Magnuson JK, Baker SE, Grigoriev IV. Zhou K, et al. Among authors: baker se. Methods Mol Biol. 2009;492:447-52. doi: 10.1007/978-1-59745-493-3_27. Methods Mol Biol. 2009. PMID: 19241050

4

Analytical and computational approaches to define the Aspergillus niger secretome.

Tsang A, Butler G, Powlowski J, Panisko EA, Baker SE. Tsang A, et al. Among authors: baker se. Fungal Genet Biol. 2009 Mar;46 Suppl 1:S153-S160. doi: 10.1016/j.fgb.2008.07.014. Fungal Genet Biol. 2009. PMID: 19618504

5

Proteome studies of filamentous fungi.

Baker SE, Panisko EA. Baker SE, et al. Methods Mol Biol. 2011;722:133-9. doi: 10.1007/978-1-61779-040-9_9. Methods Mol Biol. 2011. PMID: 21590417

6

Mapping N-linked glycosylation sites in the secretome and whole cells of Aspergillus niger using hydrazide chemistry and mass spectrometry.

Wang L, Aryal UK, Dai Z, Mason AC, Monroe ME, Tian ZX, Zhou JY, Su D, Weitz KK, Liu T, Camp DG 2nd, Smith RD, Baker SE, Qian WJ. Wang L, et al. Among authors: baker se. J Proteome Res. 2012 Jan 1;11(1):143-56. doi: 10.1021/pr200916k. Epub 2011 Dec 2. J Proteome Res. 2012. PMID: 22136231 Free PMC article.

7

Post-genomic approaches to understanding interactions between fungi and their environment.

de Vries RP, Benoit I, Doehlemann G, Kobayashi T, Magnuson JK, Panisko EA, Baker SE, Lebrun MH. de Vries RP, et al. Among authors: baker se. IMA Fungus. 2011 Jun;2(1):81-6. doi: 10.5598/imafungus.2011.02.01.11. Epub 2011 May 24. IMA Fungus. 2011. PMID: 22679591 Free PMC article.

8

Resin-assisted enrichment of N-terminal peptides for characterizing proteolytic processing.

Kim JS, Dai Z, Aryal UK, Moore RJ, Camp DG 2nd, Baker SE, Smith RD, Qian WJ. Kim JS, et al. Among authors: baker se. Anal Chem. 2013 Jul 16;85(14):6826-32. doi: 10.1021/ac401000q. Epub 2013 Jun 27. Anal Chem. 2013. PMID: 23772796 Free PMC article.

9

Impact of alg3 gene deletion on growth, development, pigment production, protein secretion, and functions of recombinant Trichoderma reesei cellobiohydrolases in Aspergillus niger.

Dai Z, Aryal UK, Shukla A, Qian WJ, Smith RD, Magnuson JK, Adney WS, Beckham GT, Brunecky R, Himmel ME, Decker SR, Ju X, Zhang X, Baker SE. Dai Z, et al. Among authors: baker se. Fungal Genet Biol. 2013 Dec;61:120-32. doi: 10.1016/j.fgb.2013.09.004. Epub 2013 Sep 25. Fungal Genet Biol. 2013. PMID: 24076077

10

Structural analysis of N- and O-glycans using ZIC-HILIC/dialysis coupled to NMR detection.

Qu Y, Feng J, Deng S, Cao L, Zhang Q, Zhao R, Zhang Z, Jiang Y, Zink EM, Baker SE, Lipton MS, Paša-Tolić L, Hu JZ, Wu S. Qu Y, et al. Among authors: baker se. Fungal Genet Biol. 2014 Nov;72:207-215. doi: 10.1016/j.fgb.2014.08.001. Epub 2014 Aug 10. Fungal Genet Biol. 2014. PMID: 25117693 Free PMC article.

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