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An accessible, efficient and global approach for the large-scale sequencing of bacterial genomes.
Perez-Sepulveda BM, Heavens D, Pulford CV, Predeus AV, Low R, Webster H, Dykes GF, Schudoma C, Rowe W, Lipscombe J, Watkins C, Kumwenda B, Shearer N, Costigan K, Baker KS, Feasey NA, Hinton JCD, Hall N; 10KSG consortium. Perez-Sepulveda BM, et al. Among authors: baker ks. Genome Biol. 2021 Dec 21;22(1):349. doi: 10.1186/s13059-021-02536-3. Genome Biol. 2021. PMID: 34930397 Free PMC article.
Innovations in genomic antimicrobial resistance surveillance.
Wheeler NE, Price V, Cunningham-Oakes E, Tsang KK, Nunn JG, Midega JT, Anjum MF, Wade MJ, Feasey NA, Peacock SJ, Jauneikaite E, Baker KS; SEDRIC Genomics Surveillance Working Group. Wheeler NE, et al. Among authors: baker ks. Lancet Microbe. 2023 Dec;4(12):e1063-e1070. doi: 10.1016/S2666-5247(23)00285-9. Epub 2023 Nov 14. Lancet Microbe. 2023. PMID: 37977163 Free article. Review.
Genomics for antimicrobial resistance surveillance to support infection prevention and control in health-care facilities.
Jauneikaite E, Baker KS, Nunn JG, Midega JT, Hsu LY, Singh SR, Halpin AL, Hopkins KL, Price JR, Srikantiah P, Egyir B, Okeke IN, Holt KE, Peacock SJ, Feasey NA; SEDRIC Genomics Surveillance Working Group. Jauneikaite E, et al. Among authors: baker ks. Lancet Microbe. 2023 Dec;4(12):e1040-e1046. doi: 10.1016/S2666-5247(23)00282-3. Epub 2023 Nov 14. Lancet Microbe. 2023. PMID: 37977161 Free article. Review.
Exploiting genomics for antimicrobial resistance surveillance at One Health interfaces.
Muloi DM, Jauneikaite E, Anjum MF, Essack SY, Singleton DA, Kasudi MR, Wade MJ, Egyir B, Nunn JG, Midega JT, Peacock SJ, Feasey NA, Baker KS, Zadoks RN; SEDRIC Genomics Surveillance Working Group. Muloi DM, et al. Among authors: baker ks. Lancet Microbe. 2023 Dec;4(12):e1056-e1062. doi: 10.1016/S2666-5247(23)00284-7. Epub 2023 Nov 14. Lancet Microbe. 2023. PMID: 37977165 Free article. Review.
Microbiological Methods Used in the Enterics for Global Health Shigella Surveillance Study.
Horne B, Badji H, Bhuiyan MTR, Romaina Cachique L, Cornick J, Hotwani A, Juma J, Ochieng JB, Abdou M, Apondi E, Atlas HE, Awuor AO, Baker KS, Ceesay BE, Charles M, Cunliffe NA, Feutz E, Galagan SR, Guindo I, Hossain MJ, Iqbal J, Jallow F, Keita NY, Khanam F, Kotloff KL, Maiden V, Manzanares Villanueva K, Mito O, Mosharraf MP, Nkeze J, Ikumapayi UN, Paredes Olortegui M, Pavlinac PB, Pinedo Vasquez T, Qadri F, Qamar FN, Qureshi S, Rahman N, Sangare A, Sen S, Peñataro Yori P, Yousafzai MT, Ahmed D, Jere KC, Kosek MN, Omore R, Permala-Booth J, Secka O, Tennant SM. Horne B, et al. Among authors: baker ks. Open Forum Infect Dis. 2024 Mar 25;11(Suppl 1):S25-S33. doi: 10.1093/ofid/ofad576. eCollection 2024 Mar. Open Forum Infect Dis. 2024. PMID: 38532949 Free PMC article.
Evidence review and recommendations for the implementation of genomics for antimicrobial resistance surveillance: reports from an international expert group.
Baker KS, Jauneikaite E, Nunn JG, Midega JT, Atun R, Holt KE, Walia K, Howden BP, Tate H, Okeke IN, Carattoli A, Hsu LY, Hopkins KL, Muloi DM, Wheeler NE, Aanensen DM, Mason LCE, Rodgus J, Hendriksen RS, Essack SY, Egyir B, Halpin AL, MacCannell DR, Campos J, Srikantiah P, Feasey NA, Peacock SJ; SEDRIC Genomics Surveillance Working Group. Baker KS, et al. Lancet Microbe. 2023 Dec;4(12):e1035-e1039. doi: 10.1016/S2666-5247(23)00281-1. Epub 2023 Nov 14. Lancet Microbe. 2023. PMID: 37977164 Free article. Review.
International recommendations for screening and preventative practices for long-term survivors of transplantation and cellular therapy: a 2023 update.
Rotz SJ, Bhatt NS, Hamilton BK, Duncan C, Aljurf M, Atsuta Y, Beebe K, Buchbinder D, Burkhard P, Carpenter PA, Chaudhri N, Elemary M, Elsawy M, Guilcher GMT, Hamad N, Karduss A, Peric Z, Purtill D, Rizzo D, Rodrigues M, Ostriz MBR, Salooja N, Schoemans H, Seber A, Sharma A, Srivastava A, Stewart SK, Baker KS, Majhail NS, Phelan R. Rotz SJ, et al. Among authors: baker ks. Bone Marrow Transplant. 2024 Feb 27. doi: 10.1038/s41409-023-02190-2. Online ahead of print. Bone Marrow Transplant. 2024. PMID: 38413823 Review.
International Recommendations for Screening and Preventative Practices for Long-Term Survivors of Transplantation and Cellular Therapy: A 2023 Update.
Rotz SJ, Bhatt NS, Hamilton BK, Duncan C, Aljurf M, Atsuta Y, Beebe K, Buchbinder D, Burkhard P, Carpenter PA, Chaudhri N, Elemary M, Elsawy M, Guilcher GM, Hamad N, Karduss A, Peric Z, Purtill D, Rizzo D, Rodrigues M, Ostriz MBR, Salooja N, Schoemans H, Seber A, Sharma A, Srivastava A, Stewart SK, Baker KS, Majhail NS, Phelan R. Rotz SJ, et al. Among authors: baker ks. Transplant Cell Ther. 2024 Apr;30(4):349-385. doi: 10.1016/j.jtct.2023.12.001. Epub 2024 Feb 27. Transplant Cell Ther. 2024. PMID: 38413247 Free article. Review.
368 results