Bai Y - Search Results

1

Functional Genomics, Genetics, and Bioinformatics 2016.

Deng Y, Wang H, Hamamoto R, Duan S, Pirooznia M, Bai Y. Deng Y, et al. Among authors: bai y. Biomed Res Int. 2016;2016:2625831. doi: 10.1155/2016/2625831. Epub 2016 Nov 22. Biomed Res Int. 2016. PMID: 27995138 Free PMC article. No abstract available.

2

MMiRNA-Viewer², a bioinformatics tool for visualizing functional annotation for MiRNA and MRNA pairs in a network.

Bai Y, Baker S, Exoo K, Dai X, Ding L, Khattak NA, Li H, Liu H, Liu X. Bai Y, et al. BMC Bioinformatics. 2020 Jul 6;21(Suppl 4):247. doi: 10.1186/s12859-020-3436-7. BMC Bioinformatics. 2020. PMID: 32631332 Free PMC article.

3

Read-Split-Run: an improved bioinformatics pipeline for identification of genome-wide non-canonical spliced regions using RNA-Seq data.

Bai Y, Kinne J, Donham B, Jiang F, Ding L, Hassler JR, Kaufman RJ. Bai Y, et al. BMC Genomics. 2016 Aug 22;17 Suppl 7(Suppl 7):503. doi: 10.1186/s12864-016-2896-7. BMC Genomics. 2016. PMID: 27556805 Free PMC article.

4

Analyzing the miRNA-Gene Networks to Mine the Important miRNAs under Skin of Human and Mouse.

Wu J, Gong H, Bai Y, Zhang W. Wu J, et al. Among authors: bai y. Biomed Res Int. 2016;2016:5469371. doi: 10.1155/2016/5469371. Epub 2016 Sep 5. Biomed Res Int. 2016. PMID: 27689084 Free PMC article.

5

Identification of streptococcal small RNAs that are putative targets of RNase III through bioinformatics analysis of RNA sequencing data.

Rath EC, Pitman S, Cho KH, Bai Y. Rath EC, et al. Among authors: bai y. BMC Bioinformatics. 2017 Dec 28;18(Suppl 14):540. doi: 10.1186/s12859-017-1897-0. BMC Bioinformatics. 2017. PMID: 29297355 Free PMC article.

6

Dissecting the biological relationship between TCGA miRNA and mRNA sequencing data using MMiRNA-Viewer.

Bai Y, Ding L, Baker S, Bai JM, Rath E, Jiang F, Wu J, Jiang H, Stuart G. Bai Y, et al. Among authors: bai jm. BMC Bioinformatics. 2016 Oct 6;17(Suppl 13):336. doi: 10.1186/s12859-016-1219-y. BMC Bioinformatics. 2016. PMID: 27766936 Free PMC article.

7

Novel bioinformatics method for identification of genome-wide non-canonical spliced regions using RNA-Seq data.

Bai Y, Hassler J, Ziyar A, Li P, Wright Z, Menon R, Omenn GS, Cavalcoli JD, Kaufman RJ, Sartor MA. Bai Y, et al. PLoS One. 2014 Jul 3;9(7):e100864. doi: 10.1371/journal.pone.0100864. eCollection 2014. PLoS One. 2014. PMID: 24991935 Free PMC article.

8

Comparison of Alternative Splicing Junction Detection Tools Using RNA-Seq Data.

Ding L, Rath E, Bai Y. Ding L, et al. Among authors: bai y. Curr Genomics. 2017 Jun;18(3):268-277. doi: 10.2174/1389202918666170215125048. Curr Genomics. 2017. PMID: 28659722 Free PMC article. Review.

9

Identifying Interaction Clusters for MiRNA and MRNA Pairs in TCGA Network.

Dai X, Ding L, Liu H, Xu Z, Jiang H, Handelman SK, Bai Y. Dai X, et al. Among authors: bai y. Genes (Basel). 2019 Sep 11;10(9):702. doi: 10.3390/genes10090702. Genes (Basel). 2019. PMID: 31514484 Free PMC article.

10

dbMTS: A comprehensive database of putative human microRNA target site SNVs and their functional predictions.

Li C, Mou C, Swartz MD, Yu B, Bai Y, Tu Y, Liu X. Li C, et al. Among authors: bai y. Hum Mutat. 2020 Jun;41(6):1123-1130. doi: 10.1002/humu.24020. Epub 2020 Apr 6. Hum Mutat. 2020. PMID: 32227657 Free PMC article.

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