Search Page
Save citations to file
Email citations
Send citations to clipboard
Add to Collections
Add to My Bibliography
Create a file for external citation management software
Your saved search
Your RSS Feed
Search Results
8 results
Filters applied: . Clear all
Results are displayed in a computed author sort order.
The Results By Year timeline is not available.
Page 1
Molecular consequences of SARS-CoV-2 liver tropism.
Nat Metab. 2022 Mar;4(3):310-319. doi: 10.1038/s42255-022-00552-6. Epub 2022 Mar 28.
Nat Metab. 2022.
PMID: 35347318
Free PMC article.
A community challenge for a pancancer drug mechanism of action inference from perturbational profile data.
Douglass EF Jr, Allaway RJ, Szalai B, Wang W, Tian T, Fernández-Torras A, Realubit R, Karan C, Zheng S, Pessia A, Tanoli Z, Jafari M, Wan F, Li S, Xiong Y, Duran-Frigola M, Bertoni M, Badia-I-Mompel P, Mateo L, Guitart-Pla O, Chung V; DREAM CTD-squared Pancancer Drug Activity Challenge Consortium; Tang J, Zeng J, Aloy P, Saez-Rodriguez J, Guinney J, Gerhard DS, Califano A.
Douglass EF Jr, et al. Among authors: badia i mompel p.
Cell Rep Med. 2022 Jan 18;3(1):100492. doi: 10.1016/j.xcrm.2021.100492. eCollection 2022 Jan 18.
Cell Rep Med. 2022.
PMID: 35106508
Free PMC article.
Item in Clipboard
Bioactivity descriptors for uncharacterized chemical compounds.
Bertoni M, Duran-Frigola M, Badia-I-Mompel P, Pauls E, Orozco-Ruiz M, Guitart-Pla O, Alcalde V, Diaz VM, Berenguer-Llergo A, Brun-Heath I, Villegas N, de Herreros AG, Aloy P.
Bertoni M, et al. Among authors: badia i mompel p.
Nat Commun. 2021 Jun 24;12(1):3932. doi: 10.1038/s41467-021-24150-4.
Nat Commun. 2021.
PMID: 34168145
Free PMC article.
Item in Clipboard
Bioactivity Profile Similarities to Expand the Repertoire of COVID-19 Drugs.
Duran-Frigola M, Bertoni M, Blanco R, Martínez V, Pauls E, Alcalde V, Turon G, Villegas N, Fernández-Torras A, Pons C, Mateo L, Guitart-Pla O, Badia-I-Mompel P, Gimeno A, Soler N, Brun-Heath I, Zaragoza H, Aloy P.
Duran-Frigola M, et al. Among authors: badia i mompel p.
J Chem Inf Model. 2020 Dec 28;60(12):5730-5734. doi: 10.1021/acs.jcim.0c00420. Epub 2020 Jul 16.
J Chem Inf Model. 2020.
PMID: 32672454
Item in Clipboard
Expanding the coverage of regulons from high-confidence prior knowledge for accurate estimation of transcription factor activities.
Müller-Dott S, Tsirvouli E, Vazquez M, Ramirez Flores RO, Badia-I-Mompel P, Fallegger R, Türei D, Lægreid A, Saez-Rodriguez J.
Müller-Dott S, et al. Among authors: badia i mompel p.
Nucleic Acids Res. 2023 Nov 10;51(20):10934-10949. doi: 10.1093/nar/gkad841.
Nucleic Acids Res. 2023.
PMID: 37843125
Free PMC article.
Item in Clipboard
Gene regulatory network inference in the era of single-cell multi-omics.
Badia-I-Mompel P, Wessels L, Müller-Dott S, Trimbour R, Ramirez Flores RO, Argelaguet R, Saez-Rodriguez J.
Badia-I-Mompel P, et al.
Nat Rev Genet. 2023 Nov;24(11):739-754. doi: 10.1038/s41576-023-00618-5. Epub 2023 Jun 26.
Nat Rev Genet. 2023.
PMID: 37365273
Review.
Item in Clipboard
Best practices for single-cell analysis across modalities.
Heumos L, Schaar AC, Lance C, Litinetskaya A, Drost F, Zappia L, Lücken MD, Strobl DC, Henao J, Curion F; Single-cell Best Practices Consortium; Schiller HB, Theis FJ.
Heumos L, et al.
Nat Rev Genet. 2023 Aug;24(8):550-572. doi: 10.1038/s41576-023-00586-w. Epub 2023 Mar 31.
Nat Rev Genet. 2023.
PMID: 37002403
Free PMC article.
Review.
Item in Clipboard
decoupleR: ensemble of computational methods to infer biological activities from omics data.
Badia-I-Mompel P, Vélez Santiago J, Braunger J, Geiss C, Dimitrov D, Müller-Dott S, Taus P, Dugourd A, Holland CH, Ramirez Flores RO, Saez-Rodriguez J.
Badia-I-Mompel P, et al.
Bioinform Adv. 2022 Mar 8;2(1):vbac016. doi: 10.1093/bioadv/vbac016. eCollection 2022.
Bioinform Adv. 2022.
PMID: 36699385
Free PMC article.
Item in Clipboard
Cite
Cite