Backman TWH - Search Results

1

The JBEI quantitative metabolic modeling library (jQMM): a python library for modeling microbial metabolism.

Birkel GW, Ghosh A, Kumar VS, Weaver D, Ando D, Backman TWH, Arkin AP, Keasling JD, Martín HG. Birkel GW, et al. Among authors: backman twh. BMC Bioinformatics. 2017 Apr 5;18(1):205. doi: 10.1186/s12859-017-1615-y. BMC Bioinformatics. 2017. PMID: 28381205 Free PMC article.

2

Erratum to: The JBEI quantitative metabolic modeling library (jQMM): a python library for modeling microbial metabolism.

Birkel GW, Ghosh A, Kumar VS, Weaver D, Ando D, Backman TWH, Arkin AP, Keasling JD, Martín HG. Birkel GW, et al. Among authors: backman twh. BMC Bioinformatics. 2017 Apr 18;18(1):219. doi: 10.1186/s12859-017-1631-y. BMC Bioinformatics. 2017. PMID: 28420344 Free PMC article. No abstract available.

3

The Experiment Data Depot: A Web-Based Software Tool for Biological Experimental Data Storage, Sharing, and Visualization.

Morrell WC, Birkel GW, Forrer M, Lopez T, Backman TWH, Dussault M, Petzold CJ, Baidoo EEK, Costello Z, Ando D, Alonso-Gutierrez J, George KW, Mukhopadhyay A, Vaino I, Keasling JD, Adams PD, Hillson NJ, Garcia Martin H. Morrell WC, et al. Among authors: backman twh. ACS Synth Biol. 2017 Dec 15;6(12):2248-2259. doi: 10.1021/acssynbio.7b00204. Epub 2017 Sep 8. ACS Synth Biol. 2017. PMID: 28826210 Free article.

4

ClusterCAD: a computational platform for type I modular polyketide synthase design.

Eng CH, Backman TWH, Bailey CB, Magnan C, García Martín H, Katz L, Baldi P, Keasling JD. Eng CH, et al. Among authors: backman twh. Nucleic Acids Res. 2018 Jan 4;46(D1):D509-D515. doi: 10.1093/nar/gkx893. Nucleic Acids Res. 2018. PMID: 29040649 Free PMC article.

5

Constraining Genome-Scale Models to Represent the Bow Tie Structure of Metabolism for ¹³C Metabolic Flux Analysis.

Backman TWH, Ando D, Singh J, Keasling JD, García Martín H. Backman TWH, et al. Metabolites. 2018 Jan 4;8(1):3. doi: 10.3390/metabo8010003. Metabolites. 2018. PMID: 29300340 Free PMC article.

6

Synthetic biology of polyketide synthases.

Yuzawa S, Backman TWH, Keasling JD, Katz L. Yuzawa S, et al. Among authors: backman twh. J Ind Microbiol Biotechnol. 2018 Jul;45(7):621-633. doi: 10.1007/s10295-018-2021-9. Epub 2018 Feb 9. J Ind Microbiol Biotechnol. 2018. PMID: 29423743

7

Structural insights into dehydratase substrate selection for the borrelidin and fluvirucin polyketide synthases.

Barajas JF, McAndrew RP, Thompson MG, Backman TWH, Pang B, de Rond T, Pereira JH, Benites VT, Martín HG, Baidoo EEK, Hillson NJ, Adams PD, Keasling JD. Barajas JF, et al. Among authors: backman twh. J Ind Microbiol Biotechnol. 2019 Aug;46(8):1225-1235. doi: 10.1007/s10295-019-02189-z. Epub 2019 May 21. J Ind Microbiol Biotechnol. 2019. PMID: 31115703 Free PMC article.

8

ClusterCAD 2.0: an updated computational platform for chimeric type I polyketide synthase and nonribosomal peptide synthetase design.

Tao XB, LaFrance S, Xing Y, Nava AA, Martin HG, Keasling JD, Backman TWH. Tao XB, et al. Among authors: backman twh. Nucleic Acids Res. 2023 Jan 6;51(D1):D532-D538. doi: 10.1093/nar/gkac1075. Nucleic Acids Res. 2023. PMID: 36416273 Free PMC article.

9

Perspectives for self-driving labs in synthetic biology.

Martin HG, Radivojevic T, Zucker J, Bouchard K, Sustarich J, Peisert S, Arnold D, Hillson N, Babnigg G, Marti JM, Mungall CJ, Beckham GT, Waldburger L, Carothers J, Sundaram S, Agarwal D, Simmons BA, Backman T, Banerjee D, Tanjore D, Ramakrishnan L, Singh A. Martin HG, et al. Curr Opin Biotechnol. 2023 Feb;79:102881. doi: 10.1016/j.copbio.2022.102881. Epub 2023 Jan 3. Curr Opin Biotechnol. 2023. PMID: 36603501 Free article. Review.

10

BayFlux: A Bayesian method to quantify metabolic Fluxes and their uncertainty at the genome scale.

Backman TWH, Schenk C, Radivojevic T, Ando D, Singh J, Czajka JJ, Costello Z, Keasling JD, Tang Y, Akhmatskaya E, Garcia Martin H. Backman TWH, et al. PLoS Comput Biol. 2023 Nov 10;19(11):e1011111. doi: 10.1371/journal.pcbi.1011111. eCollection 2023 Nov. PLoS Comput Biol. 2023. PMID: 37948450 Free PMC article.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My NCBI Filters

Text availability

Article attribute

Article type

Publication date

20 results

Search Page