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Page 1
A publicly accessible database for Clostridioides difficile genome sequences supports tracing of transmission chains and epidemics.
Frentrup M, Zhou Z, Steglich M, Meier-Kolthoff JP, Göker M, Riedel T, Bunk B, Spröer C, Overmann J, Blaschitz M, Indra A, von Müller L, Kohl TA, Niemann S, Seyboldt C, Klawonn F, Kumar N, Lawley TD, García-Fernández S, Cantón R, Del Campo R, Zimmermann O, Groß U, Achtman M, Nübel U. Frentrup M, et al. Microb Genom. 2020 Aug;6(8):mgen000410. doi: 10.1099/mgen.0.000410. Epub 2020 Jul 29. Microb Genom. 2020. PMID: 32726198 Free PMC article.
Emergence of human-adapted Salmonella enterica is linked to the Neolithization process.
Key FM, Posth C, Esquivel-Gomez LR, Hübler R, Spyrou MA, Neumann GU, Furtwängler A, Sabin S, Burri M, Wissgott A, Lankapalli AK, Vågene ÅJ, Meyer M, Nagel S, Tukhbatova R, Khokhlov A, Chizhevsky A, Hansen S, Belinsky AB, Kalmykov A, Kantorovich AR, Maslov VE, Stockhammer PW, Vai S, Zavattaro M, Riga A, Caramelli D, Skeates R, Beckett J, Gradoli MG, Steuri N, Hafner A, Ramstein M, Siebke I, Lösch S, Erdal YS, Alikhan NF, Zhou Z, Achtman M, Bos K, Reinhold S, Haak W, Kühnert D, Herbig A, Krause J. Key FM, et al. Nat Ecol Evol. 2020 Mar;4(3):324-333. doi: 10.1038/s41559-020-1106-9. Epub 2020 Feb 24. Nat Ecol Evol. 2020. PMID: 32094538 Free PMC article.
Pan-genome Analysis of Ancient and Modern Salmonella enterica Demonstrates Genomic Stability of the Invasive Para C Lineage for Millennia.
Zhou Z, Lundstrøm I, Tran-Dien A, Duchêne S, Alikhan NF, Sergeant MJ, Langridge G, Fotakis AK, Nair S, Stenøien HK, Hamre SS, Casjens S, Christophersen A, Quince C, Thomson NR, Weill FX, Ho SYW, Gilbert MTP, Achtman M. Zhou Z, et al. Curr Biol. 2018 Aug 6;28(15):2420-2428.e10. doi: 10.1016/j.cub.2018.05.058. Epub 2018 Jul 19. Curr Biol. 2018. PMID: 30033331 Free PMC article.
A genomic overview of the population structure of Salmonella.
Alikhan NF, Zhou Z, Sergeant MJ, Achtman M. Alikhan NF, et al. PLoS Genet. 2018 Apr 5;14(4):e1007261. doi: 10.1371/journal.pgen.1007261. eCollection 2018 Apr. PLoS Genet. 2018. PMID: 29621240 Free PMC article. Review.
What's in a Name? Species-Wide Whole-Genome Sequencing Resolves Invasive and Noninvasive Lineages of Salmonella enterica Serotype Paratyphi B.
Connor TR, Owen SV, Langridge G, Connell S, Nair S, Reuter S, Dallman TJ, Corander J, Tabing KC, Le Hello S, Fookes M, Doublet B, Zhou Z, Feltwell T, Ellington MJ, Herrera S, Gilmour M, Cloeckaert A, Achtman M, Parkhill J, Wain J, De Pinna E, Weill FX, Peters T, Thomson N. Connor TR, et al. mBio. 2016 Aug 23;7(4):e00527-16. doi: 10.1128/mBio.00527-16. mBio. 2016. PMID: 27555304 Free PMC article.
14 results