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Single-cell RNA-seq reveals that glioblastoma recapitulates a normal neurodevelopmental hierarchy.
Couturier CP, Ayyadhury S, Le PU, Nadaf J, Monlong J, Riva G, Allache R, Baig S, Yan X, Bourgey M, Lee C, Wang YCD, Wee Yong V, Guiot MC, Najafabadi H, Misic B, Antel J, Bourque G, Ragoussis J, Petrecca K. Couturier CP, et al. Among authors: ayyadhury s. Nat Commun. 2020 Jul 8;11(1):3406. doi: 10.1038/s41467-020-17186-5. Nat Commun. 2020. PMID: 32641768 Free PMC article.
Author Correction: Single-cell RNA-seq reveals that glioblastoma recapitulates a normal neurodevelopmental hierarchy.
Couturier CP, Ayyadhury S, Le PU, Nadaf J, Monlong J, Riva G, Allache R, Baig S, Yan X, Bourgey M, Lee C, Wang YCD, Yong VW, Guiot MC, Najafabadi H, Misic B, Antel J, Bourque G, Ragoussis J, Petrecca K. Couturier CP, et al. Among authors: ayyadhury s. Nat Commun. 2020 Aug 7;11(1):4041. doi: 10.1038/s41467-020-17979-8. Nat Commun. 2020. PMID: 32769982 Free PMC article.
The multimodality cell segmentation challenge: toward universal solutions.
Ma J, Xie R, Ayyadhury S, Ge C, Gupta A, Gupta R, Gu S, Zhang Y, Lee G, Kim J, Lou W, Li H, Upschulte E, Dickscheid T, de Almeida JG, Wang Y, Han L, Yang X, Labagnara M, Gligorovski V, Scheder M, Rahi SJ, Kempster C, Pollitt A, Espinosa L, Mignot T, Middeke JM, Eckardt JN, Li W, Li Z, Cai X, Bai B, Greenwald NF, Van Valen D, Weisbart E, Cimini BA, Cheung T, Brück O, Bader GD, Wang B. Ma J, et al. Among authors: ayyadhury s. Nat Methods. 2024 Mar 26. doi: 10.1038/s41592-024-02233-6. Online ahead of print. Nat Methods. 2024. PMID: 38532015
Molecular, Metabolic, and Subcellular Mapping of the Tumor Immune Microenvironment via 3D Targeted and Non-Targeted Multiplex Multi-Omics Analyses.
Ferri-Borgogno S, Burks JK, Seeley EH, McKee TD, Stolley DL, Basi AV, Gomez JA, Gamal BT, Ayyadhury S, Lawson BC, Yates MS, Birrer MJ, Lu KH, Mok SC. Ferri-Borgogno S, et al. Among authors: ayyadhury s. Cancers (Basel). 2024 Feb 20;16(5):846. doi: 10.3390/cancers16050846. Cancers (Basel). 2024. PMID: 38473208 Free PMC article.
Integrated transcriptomics uncovers an enhanced association between the prion protein gene expression and vesicle dynamics signatures in glioblastomas.
Boccacino JM, Dos Santos Peixoto R, Fernandes CFL, Cangiano G, Sola PR, Coelho BP, Prado MB, Melo-Escobar MI, de Sousa BP, Ayyadhury S, Bader GD, Shinjo SMO, Marie SKN, da Rocha EL, Lopes MH. Boccacino JM, et al. Among authors: ayyadhury s. BMC Cancer. 2024 Feb 13;24(1):199. doi: 10.1186/s12885-024-11914-6. BMC Cancer. 2024. PMID: 38347462 Free PMC article.
γ/δ T cell subsets in human aging using the classical α/β T cell model.
Vasudev A, Ying CT, Ayyadhury S, Puan KJ, Andiappan AK, Nyunt MS, Shadan NB, Mustafa S, Low I, Rotzschke O, Fulop T, Ng TP, Larbi A. Vasudev A, et al. Among authors: ayyadhury s. J Leukoc Biol. 2014 Oct;96(4):647-55. doi: 10.1189/jlb.5A1213-650RR. Epub 2014 Jul 7. J Leukoc Biol. 2014. PMID: 25001861