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The synergistic effect of concatenation in phylogenomics: the case in Pantoea.
Palmer M, Venter SN, McTaggart AR, Coetzee MPA, Van Wyk S, Avontuur JR, Beukes CW, Fourie G, Santana QC, Van Der Nest MA, Blom J, Steenkamp ET. Palmer M, et al. Among authors: avontuur jr. PeerJ. 2019 Apr 16;7:e6698. doi: 10.7717/peerj.6698. eCollection 2019. PeerJ. 2019. PMID: 31024760 Free PMC article.
Genome Data Provides High Support for Generic Boundaries in Burkholderia Sensu Lato.
Beukes CW, Palmer M, Manyaka P, Chan WY, Avontuur JR, van Zyl E, Huntemann M, Clum A, Pillay M, Palaniappan K, Varghese N, Mikhailova N, Stamatis D, Reddy TBK, Daum C, Shapiro N, Markowitz V, Ivanova N, Kyrpides N, Woyke T, Blom J, Whitman WB, Venter SN, Steenkamp ET. Beukes CW, et al. Among authors: avontuur jr. Front Microbiol. 2017 Jun 26;8:1154. doi: 10.3389/fmicb.2017.01154. eCollection 2017. Front Microbiol. 2017. PMID: 28694797 Free PMC article.
Mixta gen. nov., a new genus in the Erwiniaceae.
Palmer M, Steenkamp ET, Coetzee MPA, Avontuur JR, Chan WY, van Zyl E, Blom J, Venter SN. Palmer M, et al. Among authors: avontuur jr. Int J Syst Evol Microbiol. 2018 Apr;68(4):1396-1407. doi: 10.1099/ijsem.0.002540. Epub 2018 Feb 27. Int J Syst Evol Microbiol. 2018. PMID: 29485394
Corrigendum: Genome Data Provides High Support for Generic Boundaries in Burkholderia Sensu Lato.
Beukes CW, Palmer M, Manyaka P, Chan WY, Avontuur JR, van Zyl E, Huntemann M, Clum A, Pillay M, Palaniappan K, Varghese N, Mikhailova N, Stamatis D, Reddy TBK, Daum C, Shapiro N, Markowitz V, Ivanova N, Kyrpides N, Woyke T, Blom J, Whitman WB, Venter SN, Steenkamp ET. Beukes CW, et al. Among authors: avontuur jr. Front Microbiol. 2018 Mar 2;9:373. doi: 10.3389/fmicb.2018.00373. eCollection 2018. Front Microbiol. 2018. PMID: 29576763 Free PMC article.
Genome-informed Bradyrhizobium taxonomy: where to from here?
Avontuur JR, Palmer M, Beukes CW, Chan WY, Coetzee MPA, Blom J, Stępkowski T, Kyrpides NC, Woyke T, Shapiro N, Whitman WB, Venter SN, Steenkamp ET. Avontuur JR, et al. Syst Appl Microbiol. 2019 Jul;42(4):427-439. doi: 10.1016/j.syapm.2019.03.006. Epub 2019 Apr 4. Syst Appl Microbiol. 2019. PMID: 31031014
Paraburkholderia youngii sp. nov. and 'Paraburkholderia atlantica' - Brazilian and Mexican Mimosa-associated rhizobia that were previously known as Paraburkholderia tuberum sv. mimosae.
Mavima L, Beukes CW, Palmer M, De Meyer SE, James EK, Maluk M, Gross E, Dos Reis Junior FB, Avontuur JR, Chan WY, Venter SN, Steenkamp ET. Mavima L, et al. Among authors: avontuur jr. Syst Appl Microbiol. 2021 Jan;44(1):126152. doi: 10.1016/j.syapm.2020.126152. Epub 2020 Oct 28. Syst Appl Microbiol. 2021. PMID: 33276286
Bradyrhizobium altum sp. nov., Bradyrhizobium oropedii sp. nov. and Bradyrhizobium acaciae sp. nov. from South Africa show locally restricted and pantropical nodA phylogeographic patterns.
Avontuur JR, Palmer M, Beukes CW, Chan WY, Tasiya T, van Zyl E, Coetzee MPA, Stepkowski T, Venter SN, Steenkamp ET. Avontuur JR, et al. Mol Phylogenet Evol. 2022 Feb;167:107338. doi: 10.1016/j.ympev.2021.107338. Epub 2021 Oct 29. Mol Phylogenet Evol. 2022. PMID: 34757168
Delineation of Paraburkholderia tuberum sensu stricto and description of Paraburkholderia podalyriae sp. nov. nodulating the South African legume Podalyria calyptrata.
Mavima L, Beukes CW, Palmer M, De Meyer SE, James EK, Maluk M, Muasya MA, Avontuur JR, Chan WY, Venter SN, Steenkamp ET. Mavima L, et al. Among authors: avontuur jr. Syst Appl Microbiol. 2022 May;45(3):126316. doi: 10.1016/j.syapm.2022.126316. Epub 2022 Mar 8. Syst Appl Microbiol. 2022. PMID: 35339818
11 results