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Comprehensive Review of Models and Methods for Inferences in Bio-Chemical Reaction Networks.
Front Genet. 2019 Jun 14;10:549. doi: 10.3389/fgene.2019.00549. eCollection 2019.
Front Genet. 2019.
PMID: 31258548
Free PMC article.
Review.
Determining the Transcription Rates Yielding Steady-State Production of mRNA in the Lac Genetic Switch of Escherichia coli.
Atitey K, Loskot P, Rees P.
Atitey K, et al.
J Comput Biol. 2018 Sep;25(9):1023-1039. doi: 10.1089/cmb.2018.0055. Epub 2018 Jun 29.
J Comput Biol. 2018.
PMID: 29957031
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Elucidating effects of reaction rates on dynamics of the lac circuit in Escherichia coli.
Atitey K, Loskot P, Rees P.
Atitey K, et al.
Biosystems. 2019 Jan;175:1-10. doi: 10.1016/j.biosystems.2018.11.003. Epub 2018 Nov 14.
Biosystems. 2019.
PMID: 30447251
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Mathematical Modeling of Proliferative Immune Response Initiated by Interactions Between Classical Antigen-Presenting Cells Under Joint Antagonistic IL-2 and IL-4 Signaling.
Atitey K, Anchang B.
Atitey K, et al.
Front Mol Biosci. 2022 Jan 28;9:777390. doi: 10.3389/fmolb.2022.777390. eCollection 2022.
Front Mol Biosci. 2022.
PMID: 35155574
Free PMC article.
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DEGBOE: Discrete time Evolution modeling of Gene mutation through Bayesian inference using qualitative Observation of mutation Events.
Atitey K.
Atitey K.
J Biomed Inform. 2022 Oct;134:104197. doi: 10.1016/j.jbi.2022.104197. Epub 2022 Sep 6.
J Biomed Inform. 2022.
PMID: 36084801
Free PMC article.
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Model-based evaluation of spatiotemporal data reduction methods with unknown ground truth through optimal visualization and interpretability metrics.
Atitey K, Motsinger-Reif AA, Anchang B.
Atitey K, et al.
Brief Bioinform. 2023 Nov 22;25(1):bbad455. doi: 10.1093/bib/bbad455.
Brief Bioinform. 2023.
PMID: 38113074
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