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A computational learning paradigm to targeted discovery of biocatalysts from metagenomic data: A case study of lipase identification.
Biotechnol Bioeng. 2022 Apr;119(4):1115-1128. doi: 10.1002/bit.28037. Epub 2022 Feb 3.
Biotechnol Bioeng. 2022.
PMID: 35067915
IAMPE: NMR-Assisted Computational Prediction of Antimicrobial Peptides.
Kavousi K, Bagheri M, Behrouzi S, Vafadar S, Atanaki FF, Lotfabadi BT, Ariaeenejad S, Shockravi A, Moosavi-Movahedi AA.
Kavousi K, et al. Among authors: atanaki ff.
J Chem Inf Model. 2020 Oct 26;60(10):4691-4701. doi: 10.1021/acs.jcim.0c00841. Epub 2020 Sep 30.
J Chem Inf Model. 2020.
PMID: 32946226
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CpACpP: In Silico Cell-Penetrating Anticancer Peptide Prediction Using a Novel Bioinformatics Framework.
Nasiri F, Atanaki FF, Behrouzi S, Kavousi K, Bagheri M.
Nasiri F, et al. Among authors: atanaki ff.
ACS Omega. 2021 Jul 25;6(30):19846-19859. doi: 10.1021/acsomega.1c02569. eCollection 2021 Aug 3.
ACS Omega. 2021.
PMID: 34368571
Free PMC article.
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Functional map of SARS-CoV-2 3CL protease reveals tolerant and immutable sites.
Iketani S, Hong SJ, Sheng J, Bahari F, Culbertson B, Atanaki FF, Aditham AK, Kratz AF, Luck MI, Tian R, Goff SP, Montazeri H, Sabo Y, Ho DD, Chavez A.
Iketani S, et al. Among authors: atanaki ff.
Cell Host Microbe. 2022 Oct 12;30(10):1354-1362.e6. doi: 10.1016/j.chom.2022.08.003. Epub 2022 Aug 11.
Cell Host Microbe. 2022.
PMID: 36029764
Free PMC article.
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The Functional Landscape of SARS-CoV-2 3CL Protease.
Iketani S, Hong SJ, Sheng J, Bahari F, Culbertson B, Atanaki FF, Aditham AK, Kratz AF, Luck MI, Tian R, Goff SP, Montazeri H, Sabo Y, Ho DD, Chavez A.
Iketani S, et al. Among authors: atanaki ff.
bioRxiv [Preprint]. 2022 Jul 12:2022.06.23.497404. doi: 10.1101/2022.06.23.497404.
bioRxiv. 2022.
PMID: 35860222
Free PMC article.
Updated.
Preprint.
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