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Targeted nanoparticles modify neutrophil function in vivo.
Völs S, Kaisar-Iluz N, Shaul ME, Ryvkin A, Ashkenazy H, Yehuda A, Atamneh R, Heinberg A, Ben-David-Naim M, Nadav M, Hirsch S, Mitesser V, Salpeter SJ, Dzikowski R, Hayouka Z, Gershoni JM, Fridlender ZG, Granot Z. Völs S, et al. Among authors: ashkenazy h. Front Immunol. 2022 Oct 5;13:1003871. doi: 10.3389/fimmu.2022.1003871. eCollection 2022. Front Immunol. 2022. PMID: 36275643 Free PMC article.
Motifier: An IgOme Profiler Based on Peptide Motifs Using Machine Learning.
Ashkenazy H, Avram O, Ryvkin A, Roitburd-Berman A, Weiss-Ottolenghi Y, Hada-Neeman S, Gershoni JM, Pupko T. Ashkenazy H, et al. J Mol Biol. 2021 Jul 23;433(15):167071. doi: 10.1016/j.jmb.2021.167071. Epub 2021 May 28. J Mol Biol. 2021. PMID: 34052285 Free PMC article.
Deep Panning: steps towards probing the IgOme.
Ryvkin A, Ashkenazy H, Smelyanski L, Kaplan G, Penn O, Weiss-Ottolenghi Y, Privman E, Ngam PB, Woodward JE, May GD, Bell C, Pupko T, Gershoni JM. Ryvkin A, et al. Among authors: ashkenazy h. PLoS One. 2012;7(8):e41469. doi: 10.1371/journal.pone.0041469. Epub 2012 Aug 1. PLoS One. 2012. PMID: 22870226 Free PMC article.
ASAP - A Webserver for Immunoglobulin-Sequencing Analysis Pipeline.
Avram O, Vaisman-Mentesh A, Yehezkel D, Ashkenazy H, Pupko T, Wine Y. Avram O, et al. Among authors: ashkenazy h. Front Immunol. 2018 Jul 30;9:1686. doi: 10.3389/fimmu.2018.01686. eCollection 2018. Front Immunol. 2018. PMID: 30105017 Free PMC article.
PredictProtein - Predicting Protein Structure and Function for 29 Years.
Bernhofer M, Dallago C, Karl T, Satagopam V, Heinzinger M, Littmann M, Olenyi T, Qiu J, Schütze K, Yachdav G, Ashkenazy H, Ben-Tal N, Bromberg Y, Goldberg T, Kajan L, O'Donoghue S, Sander C, Schafferhans A, Schlessinger A, Vriend G, Mirdita M, Gawron P, Gu W, Jarosz Y, Trefois C, Steinegger M, Schneider R, Rost B. Bernhofer M, et al. Among authors: ashkenazy h. Nucleic Acids Res. 2021 Jul 2;49(W1):W535-W540. doi: 10.1093/nar/gkab354. Nucleic Acids Res. 2021. PMID: 33999203 Free PMC article.
A Simulation-Based Approach to Statistical Alignment.
Levy Karin E, Ashkenazy H, Hein J, Pupko T. Levy Karin E, et al. Among authors: ashkenazy h. Syst Biol. 2019 Mar 1;68(2):252-266. doi: 10.1093/sysbio/syy059. Syst Biol. 2019. PMID: 30239957
37 results