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A Simulation-Based Approach to Statistical Alignment.
Levy Karin E, Ashkenazy H, Hein J, Pupko T. Levy Karin E, et al. Among authors: ashkenazy h. Syst Biol. 2019 Mar 1;68(2):252-266. doi: 10.1093/sysbio/syy059. Syst Biol. 2019. PMID: 30239957
GUIDANCE: a web server for assessing alignment confidence scores.
Penn O, Privman E, Ashkenazy H, Landan G, Graur D, Pupko T. Penn O, et al. Among authors: ashkenazy h. Nucleic Acids Res. 2010 Jul;38(Web Server issue):W23-8. doi: 10.1093/nar/gkq443. Epub 2010 May 23. Nucleic Acids Res. 2010. PMID: 20497997 Free PMC article.
GLOOME: gain loss mapping engine.
Cohen O, Ashkenazy H, Belinky F, Huchon D, Pupko T. Cohen O, et al. Among authors: ashkenazy h. Bioinformatics. 2010 Nov 15;26(22):2914-5. doi: 10.1093/bioinformatics/btq549. Epub 2010 Sep 27. Bioinformatics. 2010. PMID: 20876605
Deep Panning: steps towards probing the IgOme.
Ryvkin A, Ashkenazy H, Smelyanski L, Kaplan G, Penn O, Weiss-Ottolenghi Y, Privman E, Ngam PB, Woodward JE, May GD, Bell C, Pupko T, Gershoni JM. Ryvkin A, et al. Among authors: ashkenazy h. PLoS One. 2012;7(8):e41469. doi: 10.1371/journal.pone.0041469. Epub 2012 Aug 1. PLoS One. 2012. PMID: 22870226 Free PMC article.
Uncovering the co-evolutionary network among prokaryotic genes.
Cohen O, Ashkenazy H, Burstein D, Pupko T. Cohen O, et al. Among authors: ashkenazy h. Bioinformatics. 2012 Sep 15;28(18):i389-i394. doi: 10.1093/bioinformatics/bts396. Bioinformatics. 2012. PMID: 22962457 Free PMC article.
CoPAP: Coevolution of presence-absence patterns.
Cohen O, Ashkenazy H, Levy Karin E, Burstein D, Pupko T. Cohen O, et al. Among authors: ashkenazy h. Nucleic Acids Res. 2013 Jul;41(Web Server issue):W232-7. doi: 10.1093/nar/gkt471. Epub 2013 Jun 8. Nucleic Acids Res. 2013. PMID: 23748951 Free PMC article.
37 results