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HMDB 4.0: the human metabolome database for 2018.
Wishart DS, Feunang YD, Marcu A, Guo AC, Liang K, Vázquez-Fresno R, Sajed T, Johnson D, Li C, Karu N, Sayeeda Z, Lo E, Assempour N, Berjanskii M, Singhal S, Arndt D, Liang Y, Badran H, Grant J, Serra-Cayuela A, Liu Y, Mandal R, Neveu V, Pon A, Knox C, Wilson M, Manach C, Scalbert A. Wishart DS, et al. Among authors: arndt d. Nucleic Acids Res. 2018 Jan 4;46(D1):D608-D617. doi: 10.1093/nar/gkx1089. Nucleic Acids Res. 2018. PMID: 29140435 Free PMC article.
HMDB: the Human Metabolome Database.
Wishart DS, Tzur D, Knox C, Eisner R, Guo AC, Young N, Cheng D, Jewell K, Arndt D, Sawhney S, Fung C, Nikolai L, Lewis M, Coutouly MA, Forsythe I, Tang P, Shrivastava S, Jeroncic K, Stothard P, Amegbey G, Block D, Hau DD, Wagner J, Miniaci J, Clements M, Gebremedhin M, Guo N, Zhang Y, Duggan GE, Macinnis GD, Weljie AM, Dowlatabadi R, Bamforth F, Clive D, Greiner R, Li L, Marrie T, Sykes BD, Vogel HJ, Querengesser L. Wishart DS, et al. Among authors: arndt d. Nucleic Acids Res. 2007 Jan;35(Database issue):D521-6. doi: 10.1093/nar/gkl923. Nucleic Acids Res. 2007. PMID: 17202168 Free PMC article.
HMDB 3.0--The Human Metabolome Database in 2013.
Wishart DS, Jewison T, Guo AC, Wilson M, Knox C, Liu Y, Djoumbou Y, Mandal R, Aziat F, Dong E, Bouatra S, Sinelnikov I, Arndt D, Xia J, Liu P, Yallou F, Bjorndahl T, Perez-Pineiro R, Eisner R, Allen F, Neveu V, Greiner R, Scalbert A. Wishart DS, et al. Among authors: arndt d. Nucleic Acids Res. 2013 Jan;41(Database issue):D801-7. doi: 10.1093/nar/gks1065. Epub 2012 Nov 17. Nucleic Acids Res. 2013. PMID: 23161693 Free PMC article.
SMPDB 2.0: big improvements to the Small Molecule Pathway Database.
Jewison T, Su Y, Disfany FM, Liang Y, Knox C, Maciejewski A, Poelzer J, Huynh J, Zhou Y, Arndt D, Djoumbou Y, Liu Y, Deng L, Guo AC, Han B, Pon A, Wilson M, Rafatnia S, Liu P, Wishart DS. Jewison T, et al. Among authors: arndt d. Nucleic Acids Res. 2014 Jan;42(Database issue):D478-84. doi: 10.1093/nar/gkt1067. Epub 2013 Nov 6. Nucleic Acids Res. 2014. PMID: 24203708 Free PMC article.
YMDB 2.0: a significantly expanded version of the yeast metabolome database.
Ramirez-Gaona M, Marcu A, Pon A, Guo AC, Sajed T, Wishart NA, Karu N, Djoumbou Feunang Y, Arndt D, Wishart DS. Ramirez-Gaona M, et al. Among authors: arndt d. Nucleic Acids Res. 2017 Jan 4;45(D1):D440-D445. doi: 10.1093/nar/gkw1058. Epub 2016 Nov 28. Nucleic Acids Res. 2017. PMID: 27899612 Free PMC article.
HMDB 5.0: the Human Metabolome Database for 2022.
Wishart DS, Guo A, Oler E, Wang F, Anjum A, Peters H, Dizon R, Sayeeda Z, Tian S, Lee BL, Berjanskii M, Mah R, Yamamoto M, Jovel J, Torres-Calzada C, Hiebert-Giesbrecht M, Lui VW, Varshavi D, Varshavi D, Allen D, Arndt D, Khetarpal N, Sivakumaran A, Harford K, Sanford S, Yee K, Cao X, Budinski Z, Liigand J, Zhang L, Zheng J, Mandal R, Karu N, Dambrova M, Schiöth HB, Greiner R, Gautam V. Wishart DS, et al. Among authors: arndt d. Nucleic Acids Res. 2022 Jan 7;50(D1):D622-D631. doi: 10.1093/nar/gkab1062. Nucleic Acids Res. 2022. PMID: 34986597 Free PMC article.
T3DB: the toxic exposome database.
Wishart D, Arndt D, Pon A, Sajed T, Guo AC, Djoumbou Y, Knox C, Wilson M, Liang Y, Grant J, Liu Y, Goldansaz SA, Rappaport SM. Wishart D, et al. Among authors: arndt d. Nucleic Acids Res. 2015 Jan;43(Database issue):D928-34. doi: 10.1093/nar/gku1004. Epub 2014 Nov 5. Nucleic Acids Res. 2015. PMID: 25378312 Free PMC article.
PPT-DB: the protein property prediction and testing database.
Wishart DS, Arndt D, Berjanskii M, Guo AC, Shi Y, Shrivastava S, Zhou J, Zhou Y, Lin G. Wishart DS, et al. Among authors: arndt d. Nucleic Acids Res. 2008 Jan;36(Database issue):D222-9. doi: 10.1093/nar/gkm800. Epub 2007 Oct 4. Nucleic Acids Res. 2008. PMID: 17916570 Free PMC article.
DrugBank 4.0: shedding new light on drug metabolism.
Law V, Knox C, Djoumbou Y, Jewison T, Guo AC, Liu Y, Maciejewski A, Arndt D, Wilson M, Neveu V, Tang A, Gabriel G, Ly C, Adamjee S, Dame ZT, Han B, Zhou Y, Wishart DS. Law V, et al. Among authors: arndt d. Nucleic Acids Res. 2014 Jan;42(Database issue):D1091-7. doi: 10.1093/nar/gkt1068. Epub 2013 Nov 6. Nucleic Acids Res. 2014. PMID: 24203711 Free PMC article.
176 results