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Page 1
Environmental stress mediates groundwater microbial community assembly.
Ning D, Wang Y, Fan Y, Wang J, Van Nostrand JD, Wu L, Zhang P, Curtis DJ, Tian R, Lui L, Hazen TC, Alm EJ, Fields MW, Poole F, Adams MWW, Chakraborty R, Stahl DA, Adams PD, Arkin AP, He Z, Zhou J. Ning D, et al. Among authors: arkin ap. Nat Microbiol. 2024 Feb;9(2):490-501. doi: 10.1038/s41564-023-01573-x. Epub 2024 Jan 11. Nat Microbiol. 2024. PMID: 38212658
How sulphate-reducing microorganisms cope with stress: lessons from systems biology.
Zhou J, He Q, Hemme CL, Mukhopadhyay A, Hillesland K, Zhou A, He Z, Van Nostrand JD, Hazen TC, Stahl DA, Wall JD, Arkin AP. Zhou J, et al. Among authors: arkin ap. Nat Rev Microbiol. 2011 Jun;9(6):452-66. doi: 10.1038/nrmicro2575. Epub 2011 May 16. Nat Rev Microbiol. 2011. PMID: 21572460 Free article. Review.
Dynamic Succession of Groundwater Functional Microbial Communities in Response to Emulsified Vegetable Oil Amendment during Sustained In Situ U(VI) Reduction.
Zhang P, Wu WM, Van Nostrand JD, Deng Y, He Z, Gihring T, Zhang G, Schadt CW, Watson D, Jardine P, Criddle CS, Brooks S, Marsh TL, Tiedje JM, Arkin AP, Zhou J. Zhang P, et al. Among authors: arkin ap. Appl Environ Microbiol. 2015 Jun 15;81(12):4164-72. doi: 10.1128/AEM.00043-15. Epub 2015 Apr 10. Appl Environ Microbiol. 2015. PMID: 25862231 Free PMC article.
Molybdenum Availability Is Key to Nitrate Removal in Contaminated Groundwater Environments.
Thorgersen MP, Lancaster WA, Vaccaro BJ, Poole FL, Rocha AM, Mehlhorn T, Pettenato A, Ray J, Waters RJ, Melnyk RA, Chakraborty R, Hazen TC, Deutschbauer AM, Arkin AP, Adams MW. Thorgersen MP, et al. Among authors: arkin ap. Appl Environ Microbiol. 2015 Aug;81(15):4976-83. doi: 10.1128/AEM.00917-15. Epub 2015 May 15. Appl Environ Microbiol. 2015. PMID: 25979890 Free PMC article.
Comparative metagenomics reveals impact of contaminants on groundwater microbiomes.
Hemme CL, Tu Q, Shi Z, Qin Y, Gao W, Deng Y, Nostrand JD, Wu L, He Z, Chain PS, Tringe SG, Fields MW, Rubin EM, Tiedje JM, Hazen TC, Arkin AP, Zhou J. Hemme CL, et al. Among authors: arkin ap. Front Microbiol. 2015 Oct 31;6:1205. doi: 10.3389/fmicb.2015.01205. eCollection 2015. Front Microbiol. 2015. PMID: 26583008 Free PMC article.
Lateral Gene Transfer in a Heavy Metal-Contaminated-Groundwater Microbial Community.
Hemme CL, Green SJ, Rishishwar L, Prakash O, Pettenato A, Chakraborty R, Deutschbauer AM, Van Nostrand JD, Wu L, He Z, Jordan IK, Hazen TC, Arkin AP, Kostka JE, Zhou J. Hemme CL, et al. Among authors: arkin ap. mBio. 2016 Apr 5;7(2):e02234-15. doi: 10.1128/mBio.02234-15. mBio. 2016. PMID: 27048805 Free PMC article.
Temporal Dynamics of In-Field Bioreactor Populations Reflect the Groundwater System and Respond Predictably to Perturbation.
King AJ, Preheim SP, Bailey KL, Robeson MS 2nd, Roy Chowdhury T, Crable BR, Hurt RA Jr, Mehlhorn T, Lowe KA, Phelps TJ, Palumbo AV, Brandt CC, Brown SD, Podar M, Zhang P, Lancaster WA, Poole F, Watson DB, W Fields M, Chandonia JM, Alm EJ, Zhou J, Adams MW, Hazen TC, Arkin AP, Elias DA. King AJ, et al. Among authors: arkin ap. Environ Sci Technol. 2017 Mar 7;51(5):2879-2889. doi: 10.1021/acs.est.6b04751. Epub 2017 Feb 10. Environ Sci Technol. 2017. PMID: 28112946
336 results