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Whole-genome re-sequencing of two Italian tomato landraces reveals sequence variations in genes associated with stress tolerance, fruit quality and long shelf-life traits.
DNA Res. 2018 Apr 1;25(2):149-160. doi: 10.1093/dnares/dsx045.
DNA Res. 2018.
PMID: 29149280
Free PMC article.
Exploiting the great potential of Sequence Capture data by a new tool, SUPER-CAP.
Ruggieri V, Anzar I, Paytuvi A, Calafiore R, Cigliano RA, Sanseverino W, Barone A.
Ruggieri V, et al. Among authors: anzar i.
DNA Res. 2017 Feb 1;24(1):81-91. doi: 10.1093/dnares/dsw050.
DNA Res. 2017.
PMID: 28011720
Free PMC article.
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Careful with That Axe, Gene, Genome Perturbation after a PEG-Mediated Protoplast Transformation in Fusarium verticillioides.
Scala V, Grottoli A, Aiese Cigliano R, Anzar I, Beccaccioli M, Fanelli C, Dall'Asta C, Battilani P, Reverberi M, Sanseverino W.
Scala V, et al. Among authors: anzar i.
Toxins (Basel). 2017 May 31;9(6):183. doi: 10.3390/toxins9060183.
Toxins (Basel). 2017.
PMID: 28561789
Free PMC article.
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Improved HLA typing of Class I and Class II alleles from next-generation sequencing data.
Sverchkova A, Anzar I, Stratford R, Clancy T.
Sverchkova A, et al. Among authors: anzar i.
HLA. 2019 Dec;94(6):504-513. doi: 10.1111/tan.13685. Epub 2019 Oct 8.
HLA. 2019.
PMID: 31496113
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NeoMutate: an ensemble machine learning framework for the prediction of somatic mutations in cancer.
Anzar I, Sverchkova A, Stratford R, Clancy T.
Anzar I, et al.
BMC Med Genomics. 2019 May 16;12(1):63. doi: 10.1186/s12920-019-0508-5.
BMC Med Genomics. 2019.
PMID: 31096972
Free PMC article.
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Personalized HLA typing leads to the discovery of novel HLA alleles and tumor-specific HLA variants.
Anzar I, Sverchkova A, Samarakoon P, Ellingsen EB, Gaudernack G, Stratford R, Clancy T.
Anzar I, et al.
HLA. 2022 Apr;99(4):313-327. doi: 10.1111/tan.14562. Epub 2022 Feb 10.
HLA. 2022.
PMID: 35073457
Free PMC article.
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Characterization of the T cell receptor repertoire and melanoma tumor microenvironment upon combined treatment with ipilimumab and hTERT vaccination.
Ellingsen EB, Bounova G, Kerzeli I, Anzar I, Simnica D, Aamdal E, Guren T, Clancy T, Mezheyeuski A, Inderberg EM, Mangsbo SM, Binder M, Hovig E, Gaudernack G.
Ellingsen EB, et al. Among authors: anzar i.
J Transl Med. 2022 Sep 11;20(1):419. doi: 10.1186/s12967-022-03624-z.
J Transl Med. 2022.
PMID: 36089578
Free PMC article.
Clinical Trial.
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The interplay between neoantigens and immune cells in sarcomas treated with checkpoint inhibition.
Anzar I, Malone B, Samarakoon P, Vardaxis I, Simovski B, Fontenelle H, Meza-Zepeda LA, Stratford R, Keung EZ, Burgess M, Tawbi HA, Myklebost O, Clancy T.
Anzar I, et al.
Front Immunol. 2023 Sep 20;14:1226445. doi: 10.3389/fimmu.2023.1226445. eCollection 2023.
Front Immunol. 2023.
PMID: 37799721
Free PMC article.
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