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Tutorial: best practices and considerations for mass-spectrometry-based protein biomarker discovery and validation.
Nakayasu ES, Gritsenko M, Piehowski PD, Gao Y, Orton DJ, Schepmoes AA, Fillmore TL, Frohnert BI, Rewers M, Krischer JP, Ansong C, Suchy-Dicey AM, Evans-Molina C, Qian WJ, Webb-Robertson BM, Metz TO. Nakayasu ES, et al. Among authors: ansong c. Nat Protoc. 2021 Aug;16(8):3737-3760. doi: 10.1038/s41596-021-00566-6. Epub 2021 Jul 9. Nat Protoc. 2021. PMID: 34244696 Free PMC article. Review.
A statistical framework for protein quantitation in bottom-up MS-based proteomics.
Karpievitch Y, Stanley J, Taverner T, Huang J, Adkins JN, Ansong C, Heffron F, Metz TO, Qian WJ, Yoon H, Smith RD, Dabney AR. Karpievitch Y, et al. Among authors: ansong c. Bioinformatics. 2009 Aug 15;25(16):2028-34. doi: 10.1093/bioinformatics/btp362. Epub 2009 Jun 17. Bioinformatics. 2009. PMID: 19535538 Free PMC article.
Studying Salmonellae and Yersiniae host-pathogen interactions using integrated 'omics and modeling.
Ansong C, Deatherage BL, Hyduke D, Schmidt B, McDermott JE, Jones MB, Chauhan S, Charusanti P, Kim YM, Nakayasu ES, Li J, Kidwai A, Niemann G, Brown RN, Metz TO, McAteer K, Heffron F, Peterson SN, Motin V, Palsson BO, Smith RD, Adkins JN. Ansong C, et al. Curr Top Microbiol Immunol. 2013;363:21-41. doi: 10.1007/82_2012_247. Curr Top Microbiol Immunol. 2013. PMID: 22886542 Free PMC article. Review.
A multi-omic systems approach to elucidating Yersinia virulence mechanisms.
Ansong C, Schrimpe-Rutledge AC, Mitchell HD, Chauhan S, Jones MB, Kim YM, McAteer K, Deatherage Kaiser BL, Dubois JL, Brewer HM, Frank BC, McDermott JE, Metz TO, Peterson SN, Smith RD, Motin VL, Adkins JN. Ansong C, et al. Mol Biosyst. 2013 Jan 27;9(1):44-54. doi: 10.1039/c2mb25287b. Epub 2012 Nov 13. Mol Biosyst. 2013. PMID: 23147219 Free PMC article.
Salmonella modulates metabolism during growth under conditions that induce expression of virulence genes.
Kim YM, Schmidt BJ, Kidwai AS, Jones MB, Deatherage Kaiser BL, Brewer HM, Mitchell HD, Palsson BO, McDermott JE, Heffron F, Smith RD, Peterson SN, Ansong C, Hyduke DR, Metz TO, Adkins JN. Kim YM, et al. Among authors: ansong c. Mol Biosyst. 2013 Jun;9(6):1522-34. doi: 10.1039/c3mb25598k. Epub 2013 Apr 5. Mol Biosyst. 2013. PMID: 23559334 Free PMC article.
Multi-omic data integration links deleted in breast cancer 1 (DBC1) degradation to chromatin remodeling in inflammatory response.
Nakayasu ES, Brown RN, Ansong C, Sydor MA, Imtiaz S, Mihai C, Sontag R, Hixson KK, Monroe ME, Sobreira TJ, Orr G, Petyuk VA, Yang F, Smith RD, Adkins JN. Nakayasu ES, et al. Among authors: ansong c. Mol Cell Proteomics. 2013 Aug;12(8):2136-47. doi: 10.1074/mcp.M112.026138. Epub 2013 May 2. Mol Cell Proteomics. 2013. PMID: 23639857 Free PMC article.
97 results