Andrews T - Search Results

1

The Malaria Cell Atlas: Single parasite transcriptomes across the complete Plasmodium life cycle.

Howick VM, Russell AJC, Andrews T, Heaton H, Reid AJ, Natarajan K, Butungi H, Metcalf T, Verzier LH, Rayner JC, Berriman M, Herren JK, Billker O, Hemberg M, Talman AM, Lawniczak MKN. Howick VM, et al. Among authors: andrews t. Science. 2019 Aug 23;365(6455):eaaw2619. doi: 10.1126/science.aaw2619. Science. 2019. PMID: 31439762 Free PMC article.

2

False signals induced by single-cell imputation.

Andrews TS, Hemberg M. Andrews TS, et al. F1000Res. 2018 Nov 2;7:1740. doi: 10.12688/f1000research.16613.2. eCollection 2018. F1000Res. 2018. PMID: 30906525 Free PMC article.

3

Challenges in unsupervised clustering of single-cell RNA-seq data.

Kiselev VY, Andrews TS, Hemberg M. Kiselev VY, et al. Nat Rev Genet. 2019 May;20(5):273-282. doi: 10.1038/s41576-018-0088-9. Nat Rev Genet. 2019. PMID: 30617341 Review.

4

Identifying cell populations with scRNASeq.

Andrews TS, Hemberg M. Andrews TS, et al. Mol Aspects Med. 2018 Feb;59:114-122. doi: 10.1016/j.mam.2017.07.002. Epub 2017 Jul 25. Mol Aspects Med. 2018. PMID: 28712804 Free article. Review.

5

M3Drop: dropout-based feature selection for scRNASeq.

Andrews TS, Hemberg M. Andrews TS, et al. Bioinformatics. 2019 Aug 15;35(16):2865-2867. doi: 10.1093/bioinformatics/bty1044. Bioinformatics. 2019. PMID: 30590489 Free PMC article.

6

Publisher Correction: Challenges in unsupervised clustering of single-cell RNA-seq data.

Kiselev VY, Andrews TS, Hemberg M. Kiselev VY, et al. Nat Rev Genet. 2019 May;20(5):310. doi: 10.1038/s41576-019-0095-5. Nat Rev Genet. 2019. PMID: 30670832

7

Tutorial: guidelines for the computational analysis of single-cell RNA sequencing data.

Andrews TS, Kiselev VY, McCarthy D, Hemberg M. Andrews TS, et al. Nat Protoc. 2021 Jan;16(1):1-9. doi: 10.1038/s41596-020-00409-w. Epub 2020 Dec 7. Nat Protoc. 2021. PMID: 33288955 Review.

8

Single-cell atlas of the first intra-mammalian developmental stage of the human parasite Schistosoma mansoni.

Diaz Soria CL, Lee J, Chong T, Coghlan A, Tracey A, Young MD, Andrews T, Hall C, Ng BL, Rawlinson K, Doyle SR, Leonard S, Lu Z, Bennett HM, Rinaldi G, Newmark PA, Berriman M. Diaz Soria CL, et al. Among authors: andrews t. Nat Commun. 2020 Dec 18;11(1):6411. doi: 10.1038/s41467-020-20092-5. Nat Commun. 2020. PMID: 33339816 Free PMC article.

9

SC3: consensus clustering of single-cell RNA-seq data.

Kiselev VY, Kirschner K, Schaub MT, Andrews T, Yiu A, Chandra T, Natarajan KN, Reik W, Barahona M, Green AR, Hemberg M. Kiselev VY, et al. Among authors: andrews t. Nat Methods. 2017 May;14(5):483-486. doi: 10.1038/nmeth.4236. Epub 2017 Mar 27. Nat Methods. 2017. PMID: 28346451 Free PMC article.

10

Single-cell transcriptomics reveals a new dynamical function of transcription factors during embryonic hematopoiesis.

Bergiers I, Andrews T, Vargel Bölükbaşı Ö, Buness A, Janosz E, Lopez-Anguita N, Ganter K, Kosim K, Celen C, Itır Perçin G, Collier P, Baying B, Benes V, Hemberg M, Lancrin C. Bergiers I, et al. Among authors: andrews t. Elife. 2018 Mar 20;7:e29312. doi: 10.7554/eLife.29312. Elife. 2018. PMID: 29555020 Free PMC article.

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