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Hijacking of transcriptional condensates by endogenous retroviruses.
Asimi V, Sampath Kumar A, Niskanen H, Riemenschneider C, Hetzel S, Naderi J, Fasching N, Popitsch N, Du M, Kretzmer H, Smith ZD, Weigert R, Walther M, Mamde S, Meierhofer D, Wittler L, Buschow R, Timmermann B, Cisse II, Ameres SL, Meissner A, Hnisz D. Asimi V, et al. Among authors: ameres sl. Nat Genet. 2022 Aug;54(8):1238-1247. doi: 10.1038/s41588-022-01132-w. Epub 2022 Jul 21. Nat Genet. 2022. PMID: 35864192 Free PMC article.
Thiol-linked alkylation of RNA to assess expression dynamics.
Herzog VA, Reichholf B, Neumann T, Rescheneder P, Bhat P, Burkard TR, Wlotzka W, von Haeseler A, Zuber J, Ameres SL. Herzog VA, et al. Among authors: ameres sl. Nat Methods. 2017 Dec;14(12):1198-1204. doi: 10.1038/nmeth.4435. Epub 2017 Sep 25. Nat Methods. 2017. PMID: 28945705 Free PMC article.
Transcriptome-Wide Profiling of RNA Stability.
Fasching N, Petržílek J, Popitsch N, Herzog VA, Ameres SL. Fasching N, et al. Among authors: ameres sl. Methods Mol Biol. 2022;2404:311-330. doi: 10.1007/978-1-0716-1851-6_17. Methods Mol Biol. 2022. PMID: 34694617
Mime-seq 2.0: a method to sequence microRNAs from specific mouse cell types.
Mandlbauer A, Sun Q, Popitsch N, Schwickert T, Spanova M, Wang J, Ameres SL, Busslinger M, Cochella L. Mandlbauer A, et al. Among authors: ameres sl. EMBO J. 2024 Apr 30. doi: 10.1038/s44318-024-00102-8. Online ahead of print. EMBO J. 2024. PMID: 38689024 Free article.
Genetic and mechanistic diversity of piRNA 3'-end formation.
Hayashi R, Schnabl J, Handler D, Mohn F, Ameres SL, Brennecke J. Hayashi R, et al. Among authors: ameres sl. Nature. 2016 Nov 24;539(7630):588-592. doi: 10.1038/nature20162. Epub 2016 Nov 16. Nature. 2016. PMID: 27851737 Free PMC article.
Cell-type specific sequencing of microRNAs from complex animal tissues.
Alberti C, Manzenreither RA, Sowemimo I, Burkard TR, Wang J, Mahofsky K, Ameres SL, Cochella L. Alberti C, et al. Among authors: ameres sl. Nat Methods. 2018 Apr;15(4):283-289. doi: 10.1038/nmeth.4610. Epub 2018 Feb 26. Nat Methods. 2018. PMID: 29481550 Free PMC article.
40 results