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TiSA: TimeSeriesAnalysis-a pipeline for the analysis of longitudinal transcriptomics data.
Lefol Y, Korfage T, Mjelle R, Prebensen C, Lüders T, Müller B, Krokan H, Sarno A, Alsøe L; CONSORTIUM LEMONAID; Berdal JE, Sætrom P, Nilsen H, Domanska D. Lefol Y, et al. Among authors: alsoe l. NAR Genom Bioinform. 2023 Mar 3;5(1):lqad020. doi: 10.1093/nargab/lqad020. eCollection 2023 Mar. NAR Genom Bioinform. 2023. PMID: 36879899 Free PMC article.
SMUG1 Promotes Telomere Maintenance through Telomerase RNA Processing.
Kroustallaki P, Lirussi L, Carracedo S, You P, Esbensen QY, Götz A, Jobert L, Alsøe L, Sætrom P, Gagos S, Nilsen H. Kroustallaki P, et al. Among authors: alsoe l. Cell Rep. 2019 Aug 13;28(7):1690-1702.e10. doi: 10.1016/j.celrep.2019.07.040. Cell Rep. 2019. PMID: 31412240 Free article.
TLR9 stimulation of B-cells induces transcription of p53 and prevents spontaneous and irradiation-induced cell death independent of DNA damage responses. Implications for Common variable immunodeficiency.
Holm KL, Syljuåsen RG, Hasvold G, Alsøe L, Nilsen H, Ivanauskiene K, Collas P, Shaposhnikov S, Collins A, Indrevær RL, Aukrust P, Fevang B, Blomhoff HK. Holm KL, et al. Among authors: alsoe l. PLoS One. 2017 Oct 3;12(10):e0185708. doi: 10.1371/journal.pone.0185708. eCollection 2017. PLoS One. 2017. PMID: 28973009 Free PMC article.
Human APOBEC3B promotes tumor development in vivo including signature mutations and metastases.
Durfee C, Temiz NA, Levin-Klein R, Argyris PP, Alsøe L, Carracedo S, Alonso de la Vega A, Proehl J, Holzhauer AM, Seeman ZJ, Liu X, Lin YT, Vogel RI, Sotillo R, Nilsen H, Harris RS. Durfee C, et al. Among authors: alsoe l. Cell Rep Med. 2023 Oct 17;4(10):101211. doi: 10.1016/j.xcrm.2023.101211. Epub 2023 Oct 4. Cell Rep Med. 2023. PMID: 37797615 Free PMC article.
SMUG1 regulates fat homeostasis leading to a fatty liver phenotype in mice.
Carracedo S, Lirussi L, Alsøe L, Segers F, Wang C, Bartosova Z, Bohov P, Tekin NB, Kong XY, Esbensen QY, Chen L, Wennerström A, Kroustallaki P, Ceolotto D, Tönjes A, Berge RK, Bruheim P, Wong G, Böttcher Y, Halvorsen B, Nilsen H. Carracedo S, et al. Among authors: alsoe l. DNA Repair (Amst). 2022 Dec;120:103410. doi: 10.1016/j.dnarep.2022.103410. Epub 2022 Oct 3. DNA Repair (Amst). 2022. PMID: 36244177
Human APOBEC3B promotes tumor heterogeneity in vivo including signature mutations and metastases.
Durfee C, Temiz NA, Levin-Klein R, Argyris PP, Alsøe L, Carracedo S, de la Vega AA, Proehl J, Holzhauer AM, Seeman ZJ, Lin YT, Vogel RI, Sotillo R, Nilsen H, Harris RS. Durfee C, et al. Among authors: alsoe l. bioRxiv [Preprint]. 2023 Feb 25:2023.02.24.529970. doi: 10.1101/2023.02.24.529970. bioRxiv. 2023. PMID: 36865194 Free PMC article. Updated. Preprint.
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