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Geographical and temporal distribution of SARS-CoV-2 clades in the WHO European Region, January to June 2020.
Alm E, Broberg EK, Connor T, Hodcroft EB, Komissarov AB, Maurer-Stroh S, Melidou A, Neher RA, O'Toole Á, Pereyaslov D; WHO European Region sequencing laboratories and GISAID EpiCoV group; WHO European Region sequencing laboratories and GISAID EpiCoV group*. Alm E, et al. Euro Surveill. 2020 Aug;25(32):2001410. doi: 10.2807/1560-7917.ES.2020.25.32.2001410. Euro Surveill. 2020. PMID: 32794443 Free PMC article.
Investigation of a food-borne outbreak of gastroenteritis in a school canteen revealed a variant of sapovirus genogroup V not detected by standard PCR, Sollentuna, Sweden, 2016.
Hergens MP, Nederby Öhd J, Alm E, Askling HH, Helgesson S, Insulander M, Lagerqvist N, Svenungsson B, Tihane M, Tolfvenstam T, Follin P. Hergens MP, et al. Among authors: alm e. Euro Surveill. 2017 Jun 1;22(22):30543. doi: 10.2807/1560-7917.ES.2017.22.22.30543. Euro Surveill. 2017. PMID: 28602163 Free PMC article.
PulseNet International: Vision for the implementation of whole genome sequencing (WGS) for global food-borne disease surveillance.
Nadon C, Van Walle I, Gerner-Smidt P, Campos J, Chinen I, Concepcion-Acevedo J, Gilpin B, Smith AM, Man Kam K, Perez E, Trees E, Kubota K, Takkinen J, Nielsen EM, Carleton H; FWD-NEXT Expert Panel. Nadon C, et al. Euro Surveill. 2017 Jun 8;22(23):30544. doi: 10.2807/1560-7917.ES.2017.22.23.30544. Euro Surveill. 2017. PMID: 28662764 Free PMC article. Review.
Systematic Review of Whole-Genome Sequencing Data To Predict Phenotypic Drug Resistance and Susceptibility in Swedish Mycobacterium tuberculosis Isolates, 2016 to 2018.
Enkirch T, Werngren J, Groenheit R, Alm E, Advani R, Lind Karlberg M, Mansjö M. Enkirch T, et al. Among authors: alm e. Antimicrob Agents Chemother. 2020 Apr 21;64(5):e02550-19. doi: 10.1128/AAC.02550-19. Print 2020 Apr 21. Antimicrob Agents Chemother. 2020. PMID: 32122893 Free PMC article.
Cross-border spread of blaNDM-1- and blaOXA-48-positive Klebsiella pneumoniae: a European collaborative analysis of whole genome sequencing and epidemiological data, 2014 to 2019.
Ludden C, Lötsch F, Alm E, Kumar N, Johansson K, Albiger B, Huang TD, Denis O, Hammerum AM, Hasman H, Jalava J, Räisänen K, Dortet L, Jousset AB, Gatermann S, Haller S, Cormican M, Brennan W, Del Grosso M, Monaco M, Schouls L, Samuelsen Ø, Pirš M, Cerar T, Oteo-Iglesias J, Pérez-Vázquez M, Sjöström K, Edquist P, Hopkins KL, Struelens MJ, Palm D, Monnet DL, Kohlenberg A. Ludden C, et al. Among authors: alm e. Euro Surveill. 2020 May;25(20):2000627. doi: 10.2807/1560-7917.ES.2020.25.20.2000627. Euro Surveill. 2020. PMID: 32458791 Free PMC article.
A new assay for quantitative detection of hepatitis A virus.
Persson S, Alm E, Karlsson M, Enkirch T, Norder H, Eriksson R, Simonsson M, Ellström P. Persson S, et al. Among authors: alm e. J Virol Methods. 2021 Feb;288:114010. doi: 10.1016/j.jviromet.2020.114010. Epub 2020 Nov 2. J Virol Methods. 2021. PMID: 33152410 Free article.
Virological surveillance of influenza viruses in the WHO European Region in 2019/20 - impact of the COVID-19 pandemic.
Melidou A, Pereyaslov D, Hungnes O, Prosenc K, Alm E, Adlhoch C, Fielding J, Sneiderman M, Martinuka O, Celentano LP, Pebody R; WHO European Region influenza surveillance network; WHO European Region Influenza Surveillance Network author list. Melidou A, et al. Among authors: alm e. Euro Surveill. 2020 Nov;25(46):2001822. doi: 10.2807/1560-7917.ES.2020.25.46.2001822. Euro Surveill. 2020. PMID: 33213683 Free PMC article.
SARS-CoV-2 Variants of Interest and Concern naming scheme conducive for global discourse.
Konings F, Perkins MD, Kuhn JH, Pallen MJ, Alm EJ, Archer BN, Barakat A, Bedford T, Bhiman JN, Caly L, Carter LL, Cullinane A, de Oliveira T, Druce J, El Masry I, Evans R, Gao GF, Gorbalenya AE, Hamblion E, Herring BL, Hodcroft E, Holmes EC, Kakkar M, Khare S, Koopmans MPG, Korber B, Leite J, MacCannell D, Marklewitz M, Maurer-Stroh S, Rico JAM, Munster VJ, Neher R, Munnink BO, Pavlin BI, Peiris M, Poon L, Pybus O, Rambaut A, Resende P, Subissi L, Thiel V, Tong S, van der Werf S, von Gottberg A, Ziebuhr J, Van Kerkhove MD. Konings F, et al. Among authors: alm ej. Nat Microbiol. 2021 Jul;6(7):821-823. doi: 10.1038/s41564-021-00932-w. Nat Microbiol. 2021. PMID: 34108654 No abstract available.
264 results