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The role of APOBEC3B in lung tumor evolution and targeted cancer therapy resistance.
Nat Genet. 2024 Jan;56(1):60-73. doi: 10.1038/s41588-023-01592-8. Epub 2023 Dec 4.
Nat Genet. 2024.
PMID: 38049664
Free PMC article.
Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial cell states.
Song H, Weinstein HNW, Allegakoen P, Wadsworth MH 2nd, Xie J, Yang H, Castro EA, Lu KL, Stohr BA, Feng FY, Carroll PR, Wang B, Cooperberg MR, Shalek AK, Huang FW.
Song H, et al. Among authors: allegakoen p.
Nat Commun. 2022 Jan 10;13(1):141. doi: 10.1038/s41467-021-27322-4.
Nat Commun. 2022.
PMID: 35013146
Free PMC article.
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MYC-Driven Pathways in Breast Cancer Subtypes.
Fallah Y, Brundage J, Allegakoen P, Shajahan-Haq AN.
Fallah Y, et al. Among authors: allegakoen p.
Biomolecules. 2017 Jul 11;7(3):53. doi: 10.3390/biom7030053.
Biomolecules. 2017.
PMID: 28696357
Free PMC article.
Review.
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An organism-wide atlas of hormonal signaling based on the mouse lemur single-cell transcriptome.
Liu S, Ezran C, Wang MFZ, Li Z, Awayan K; Tabula Microcebus Consortium; Long JZ, De Vlaminck I, Wang S, Epelbaum J, Kuo CS, Terrien J, Krasnow MA, Ferrell JE Jr.
Liu S, et al.
Nat Commun. 2024 Mar 11;15(1):2188. doi: 10.1038/s41467-024-46070-9.
Nat Commun. 2024.
PMID: 38467625
Free PMC article.
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RPL22 is a tumor suppressor in MSI-high cancers and a key splicing regulator of MDM4.
Weinstein HNW, Hu K, Fish L, Chen YA, Allegakoen P, Hui KSF, Pham JH, Baco MB, Song H, Giacomelli AO, Vazquez F, Ghandi M, Goodarzi H, Huang FW.
Weinstein HNW, et al. Among authors: allegakoen p.
bioRxiv [Preprint]. 2023 Dec 10:2023.12.10.570873. doi: 10.1101/2023.12.10.570873.
bioRxiv. 2023.
PMID: 38106152
Free PMC article.
Preprint.
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Adversarial domain translation networks for integrating large-scale atlas-level single-cell datasets.
Zhao J, Wang G, Ming J, Lin Z, Wang Y; Tabula Microcebus Consortium; Wu AR, Yang C.
Zhao J, et al.
Nat Comput Sci. 2022 May;2(5):317-330. doi: 10.1038/s43588-022-00251-y. Epub 2022 May 30.
Nat Comput Sci. 2022.
PMID: 38177826
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The Epithelial to Mesenchymal Transition Promotes Glutamine Independence by Suppressing GLS2 Expression.
Ramirez-Peña E, Arnold J, Shivakumar V, Joseph R, Vidhya Vijay G, den Hollander P, Bhangre N, Allegakoen P, Prasad R, Conley Z, Matés JM, Márquez J, Chang JT, Vasaikar S, Soundararajan R, Sreekumar A, Mani SA.
Ramirez-Peña E, et al. Among authors: allegakoen p.
Cancers (Basel). 2019 Oct 22;11(10):1610. doi: 10.3390/cancers11101610.
Cancers (Basel). 2019.
PMID: 31652551
Free PMC article.
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