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Proteome scale comparative modeling for conserved drug and vaccine targets identification in Corynebacterium pseudotuberculosis.
Hassan SS, Tiwari S, Guimarães LC, Jamal SB, Folador E, Sharma NB, de Castro Soares S, Almeida S, Ali A, Islam A, Póvoa FD, de Abreu VA, Jain N, Bhattacharya A, Juneja L, Miyoshi A, Silva A, Barh D, Turjanski A, Azevedo V, Ferreira RS. Hassan SS, et al. Among authors: ali a. BMC Genomics. 2014;15 Suppl 7(Suppl 7):S3. doi: 10.1186/1471-2164-15-S7-S3. Epub 2014 Oct 27. BMC Genomics. 2014. PMID: 25573232 Free PMC article.
Complete genome sequence of Corynebacterium pseudotuberculosis I19, a strain isolated from a cow in Israel with bovine mastitis.
Silva A, Schneider MP, Cerdeira L, Barbosa MS, Ramos RT, Carneiro AR, Santos R, Lima M, D'Afonseca V, Almeida SS, Santos AR, Soares SC, Pinto AC, Ali A, Dorella FA, Rocha F, de Abreu VA, Trost E, Tauch A, Shpigel N, Miyoshi A, Azevedo V. Silva A, et al. Among authors: ali a. J Bacteriol. 2011 Jan;193(1):323-4. doi: 10.1128/JB.01211-10. Epub 2010 Oct 29. J Bacteriol. 2011. PMID: 21037006 Free PMC article.
A novel comparative genomics analysis for common drug and vaccine targets in Corynebacterium pseudotuberculosis and other CMN group of human pathogens.
Barh D, Jain N, Tiwari S, Parida BP, D'Afonseca V, Li L, Ali A, Santos AR, Guimarães LC, de Castro Soares S, Miyoshi A, Bhattacharjee A, Misra AN, Silva A, Kumar A, Azevedo V. Barh D, et al. Among authors: ali a. Chem Biol Drug Des. 2011 Jul;78(1):73-84. doi: 10.1111/j.1747-0285.2011.01118.x. Epub 2011 May 25. Chem Biol Drug Des. 2011. PMID: 21443692
Evidence for reductive genome evolution and lateral acquisition of virulence functions in two Corynebacterium pseudotuberculosis strains.
Ruiz JC, D'Afonseca V, Silva A, Ali A, Pinto AC, Santos AR, Rocha AA, Lopes DO, Dorella FA, Pacheco LG, Costa MP, Turk MZ, Seyffert N, Moraes PM, Soares SC, Almeida SS, Castro TL, Abreu VA, Trost E, Baumbach J, Tauch A, Schneider MP, McCulloch J, Cerdeira LT, Ramos RT, Zerlotini A, Dominitini A, Resende DM, Coser EM, Oliveira LM, Pedrosa AL, Vieira CU, Guimarães CT, Bartholomeu DC, Oliveira DM, Santos FR, Rabelo ÉM, Lobo FP, Franco GR, Costa AF, Castro IM, Dias SR, Ferro JA, Ortega JM, Paiva LV, Goulart LR, Almeida JF, Ferro MI, Carneiro NP, Falcão PR, Grynberg P, Teixeira SM, Brommonschenkel S, Oliveira SC, Meyer R, Moore RJ, Miyoshi A, Oliveira GC, Azevedo V. Ruiz JC, et al. Among authors: ali a. PLoS One. 2011 Apr 18;6(4):e18551. doi: 10.1371/journal.pone.0018551. PLoS One. 2011. PMID: 21533164 Free PMC article.
Whole-genome sequence of Corynebacterium pseudotuberculosis PAT10 strain isolated from sheep in Patagonia, Argentina.
Cerdeira LT, Pinto AC, Schneider MP, de Almeida SS, dos Santos AR, Barbosa EG, Ali A, Barbosa MS, Carneiro AR, Ramos RT, de Oliveira RS, Barh D, Barve N, Zambare V, Belchior SE, Guimarães LC, de Castro Soares S, Dorella FA, Rocha FS, de Abreu VA, Tauch A, Trost E, Miyoshi A, Azevedo V, Silva A. Cerdeira LT, et al. Among authors: ali a. J Bacteriol. 2011 Nov;193(22):6420-1. doi: 10.1128/JB.06044-11. J Bacteriol. 2011. PMID: 22038974 Free PMC article.
Complete genome sequence of Corynebacterium pseudotuberculosis strain CIP 52.97, isolated from a horse in Kenya.
Cerdeira LT, Schneider MP, Pinto AC, de Almeida SS, dos Santos AR, Barbosa EG, Ali A, Aburjaile FF, de Abreu VA, Guimarães LC, Soares Sde C, Dorella FA, Rocha FS, Bol E, Gomes de Sá PH, Lopes TS, Barbosa MS, Carneiro AR, Jucá Ramos RT, Coimbra NA, Lima AR, Barh D, Jain N, Tiwari S, Raja R, Zambare V, Ghosh P, Trost E, Tauch A, Miyoshi A, Azevedo V, Silva A. Cerdeira LT, et al. Among authors: ali a. J Bacteriol. 2011 Dec;193(24):7025-6. doi: 10.1128/JB.06293-11. J Bacteriol. 2011. PMID: 22123771 Free PMC article.
Complete genome sequence of Corynebacterium pseudotuberculosis strain Cp267, isolated from a llama.
Lopes T, Silva A, Thiago R, Carneiro A, Dorella FA, Rocha FS, dos Santos AR, Lima AR, Guimarães LC, Barbosa EG, Ribeiro D, Fiaux KK, Diniz CA, de Abreu VA, de Almeida SS, Hassan SS, Ali A, Bakhtiar SM, Aburjaile FF, Pinto AC, Soares Sde C, Pereira Ude P, Schneider MP, Miyoshi A, Edman J, Spier S, Azevedo V. Lopes T, et al. Among authors: ali a. J Bacteriol. 2012 Jul;194(13):3567-8. doi: 10.1128/JB.00461-12. J Bacteriol. 2012. PMID: 22689248 Free PMC article.
Complete genome sequence of Corynebacterium pseudotuberculosis strain 1/06-A, isolated from a horse in North America.
Pethick FE, Lainson AF, Yaga R, Flockhart A, Smith DG, Donachie W, Cerdeira LT, Silva A, Bol E, Lopes TS, Barbosa MS, Pinto AC, Dos Santos AR, Soares SC, Almeida SS, Guimaraes LC, Aburjaile FF, Abreu VA, Ribeiro D, Fiaux KK, Diniz CA, Barbosa EG, Pereira UP, Hassan SS, Ali A, Bakhtiar SM, Dorella FA, Carneiro AR, Ramos RT, Rocha FS, Schneider MP, Miyoshi A, Azevedo V, Fontaine MC. Pethick FE, et al. Among authors: ali a. J Bacteriol. 2012 Aug;194(16):4476. doi: 10.1128/JB.00922-12. J Bacteriol. 2012. PMID: 22843601 Free PMC article.
Complete genome sequences of Corynebacterium pseudotuberculosis strains 3/99-5 and 42/02-A, isolated from sheep in Scotland and Australia, respectively.
Pethick FE, Lainson AF, Yaga R, Flockhart A, Smith DG, Donachie W, Cerdeira LT, Silva A, Bol E, Lopes TS, Barbosa MS, Pinto AC, dos Santos AR, Soares SC, Almeida SS, Guimaraes LC, Aburjaile FF, Abreu VA, Ribeiro D, Fiaux KK, Diniz CA, Barbosa EG, Pereira UP, Hassan SS, Ali A, Bakhtiar SM, Dorella FA, Carneiro AR, Ramos RT, Rocha FS, Schneider MP, Miyoshi A, Azevedo V, Fontaine MC. Pethick FE, et al. Among authors: ali a. J Bacteriol. 2012 Sep;194(17):4736-7. doi: 10.1128/JB.00918-12. J Bacteriol. 2012. PMID: 22887652 Free PMC article.
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