Alfonzo J - Search Results

1

Trypanosomes as a magnifying glass for cell and molecular biology.

Lukeš J, Speijer D, Zíková A, Alfonzo JD, Hashimi H, Field MC. Lukeš J, et al. Among authors: alfonzo jd. Trends Parasitol. 2023 Nov;39(11):902-912. doi: 10.1016/j.pt.2023.08.004. Epub 2023 Sep 5. Trends Parasitol. 2023. PMID: 37679284 Review.

2

The tRNA methyltransferase TrmB is critical for Acinetobacter baumannii stress responses and pulmonary infection.

McGuffey JC, Jackson-Litteken CD, Di Venanzio G, Zimmer AA, Lewis JM, Distel JS, Kim KQ, Zaher HS, Alfonzo J, Scott NE, Feldman MF. McGuffey JC, et al. Among authors: alfonzo j. mBio. 2023 Oct 31;14(5):e0141623. doi: 10.1128/mbio.01416-23. Epub 2023 Aug 17. mBio. 2023. PMID: 37589464 Free PMC article.

3

tRNA^Tyr has an unusually short half-life in Trypanosoma brucei.

Silveira d'Almeida G, Casius A, Henderson JC, Knuesel S, Aphasizhev R, Aphasizheva I, Manning AC, Lowe TM, Alfonzo JD. Silveira d'Almeida G, et al. Among authors: alfonzo jd. RNA. 2023 Aug;29(8):1243-1254. doi: 10.1261/rna.079674.123. Epub 2023 May 17. RNA. 2023. PMID: 37197826

4

Structural basis for sequence-independent substrate selection by eukaryotic wobble base tRNA deaminase ADAT2/3.

Dolce LG, Zimmer AA, Tengo L, Weis F, Rubio MAT, Alfonzo JD, Kowalinski E. Dolce LG, et al. Among authors: alfonzo jd. Nat Commun. 2022 Nov 8;13(1):6737. doi: 10.1038/s41467-022-34441-z. Nat Commun. 2022. PMID: 36347890 Free PMC article.

5

Next steps in transcriptomics: Understanding RNA modifications at a genomic scale.

Accornero F, Alfonzo JD. Accornero F, et al. Among authors: alfonzo jd. Methods. 2022 Nov;207:1-2. doi: 10.1016/j.ymeth.2022.08.012. Epub 2022 Aug 24. Methods. 2022. PMID: 36030057 No abstract available.

6

Genomic and transcriptomic profiling of phoenix colonies.

Sindeldecker D, Dunn M, Zimmer A, Anderson M, Alfonzo J, Stoodley P. Sindeldecker D, et al. Among authors: alfonzo j. Sci Rep. 2022 Aug 12;12(1):13726. doi: 10.1038/s41598-022-18059-1. Sci Rep. 2022. PMID: 35962051 Free PMC article.

7

Characterization of ADAT2/3 molecules in Trypanosoma cruzi and regulation of mucin gene expression by tRNA editing.

Bertotti S, Fleming I, Cámara MLM, Centeno Cameán C, Carmona SJ, Agüero F, Balouz V, Zahn A, Di Noia JM, Alfonzo JD, Buscaglia CA. Bertotti S, et al. Among authors: alfonzo jd. Biochem J. 2022 Feb 17;479(4):561-580. doi: 10.1042/BCJ20210850. Biochem J. 2022. PMID: 35136964

8

Dynamic queuosine changes in tRNA couple nutrient levels to codon choice in Trypanosoma brucei.

Dixit S, Kessler AC, Henderson J, Pan X, Zhao R, D'Almeida GS, Kulkarni S, Rubio MAT, Hegedűsová E, Ross RL, Limbach PA, Green BD, Paris Z, Alfonzo JD. Dixit S, et al. Among authors: alfonzo jd. Nucleic Acids Res. 2021 Dec 16;49(22):12986-12999. doi: 10.1093/nar/gkab1204. Nucleic Acids Res. 2021. PMID: 34883512 Free PMC article.

9

METTLing in the right place: METTL8 is a mitochondrial tRNA-specific methyltransferase.

Kowalinski E, Alfonzo JD. Kowalinski E, et al. Among authors: alfonzo jd. Mol Cell. 2021 Dec 2;81(23):4765-4767. doi: 10.1016/j.molcel.2021.11.009. Mol Cell. 2021. PMID: 34861186 Free article.

10

The importance of RNA modifications: From cells to muscle physiology.

Das AS, Alfonzo JD, Accornero F. Das AS, et al. Among authors: alfonzo jd. Wiley Interdiscip Rev RNA. 2022 Jul;13(4):e1700. doi: 10.1002/wrna.1700. Epub 2021 Oct 19. Wiley Interdiscip Rev RNA. 2022. PMID: 34664402 Free PMC article. Review.

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