Alexopoulos LG - Search Results

1

Cadherin-11, Sparc-related modular calcium binding protein-2, and Pigment epithelium-derived factor are promising non-invasive biomarkers of kidney fibrosis.

Schmidt IM, Colona MR, Kestenbaum BR, Alexopoulos LG, Palsson R, Srivastava A, Liu J, Stillman IE, Rennke HG, Vaidya VS, Wu H, Humphreys BD, Waikar SS; Kidney Precision Medicine Project (KPMP). Schmidt IM, et al. Among authors: alexopoulos lg. Kidney Int. 2021 Sep;100(3):672-683. doi: 10.1016/j.kint.2021.04.037. Epub 2021 May 27. Kidney Int. 2021. PMID: 34051265 Free PMC article.

2

A Functional Landscape of CKD Entities From Public Transcriptomic Data.

Tajti F, Kuppe C, Antoranz A, Ibrahim MM, Kim H, Ceccarelli F, Holland CH, Olauson H, Floege J, Alexopoulos LG, Kramann R, Saez-Rodriguez J. Tajti F, et al. Among authors: alexopoulos lg. Kidney Int Rep. 2019 Nov 13;5(2):211-224. doi: 10.1016/j.ekir.2019.11.005. eCollection 2020 Feb. Kidney Int Rep. 2019. PMID: 32043035 Free PMC article.

3

Lysophosphatidic Acid Is a Proinflammatory Stimulus of Renal Tubular Epithelial Cells.

Magkrioti C, Antonopoulou G, Fanidis D, Pliaka V, Sakellaropoulos T, Alexopoulos LG, Ullmer C, Aidinis V. Magkrioti C, et al. Among authors: alexopoulos lg. Int J Mol Sci. 2022 Jul 5;23(13):7452. doi: 10.3390/ijms23137452. Int J Mol Sci. 2022. PMID: 35806457 Free PMC article.

4

The logic of EGFR/ErbB signaling: theoretical properties and analysis of high-throughput data.

Samaga R, Saez-Rodriguez J, Alexopoulos LG, Sorger PK, Klamt S. Samaga R, et al. Among authors: alexopoulos lg. PLoS Comput Biol. 2009 Aug;5(8):e1000438. doi: 10.1371/journal.pcbi.1000438. Epub 2009 Aug 7. PLoS Comput Biol. 2009. PMID: 19662154 Free PMC article.

5

Identifying drug effects via pathway alterations using an integer linear programming optimization formulation on phosphoproteomic data.

Mitsos A, Melas IN, Siminelakis P, Chairakaki AD, Saez-Rodriguez J, Alexopoulos LG. Mitsos A, et al. Among authors: alexopoulos lg. PLoS Comput Biol. 2009 Dec;5(12):e1000591. doi: 10.1371/journal.pcbi.1000591. Epub 2009 Dec 4. PLoS Comput Biol. 2009. PMID: 19997482 Free PMC article.

6

Construction of signaling pathways and identification of drug effects on the liver cancer cell HepG2.

Alexopoulos LG, Melas IN, Chairakaki AD, Saez-Rodriguez J, Mitsos A. Alexopoulos LG, et al. Annu Int Conf IEEE Eng Med Biol Soc. 2010;2010:6717-20. doi: 10.1109/IEMBS.2010.5626246. Annu Int Conf IEEE Eng Med Biol Soc. 2010. PMID: 21096084

7

Crowdsourcing network inference: the DREAM predictive signaling network challenge.

Prill RJ, Saez-Rodriguez J, Alexopoulos LG, Sorger PK, Stolovitzky G. Prill RJ, et al. Among authors: alexopoulos lg. Sci Signal. 2011 Aug 30;4(189):mr7. doi: 10.1126/scisignal.2002212. Sci Signal. 2011. PMID: 21900204 Free PMC article.

8

Non Linear Programming (NLP) formulation for quantitative modeling of protein signal transduction pathways.

Mitsos A, Melas IN, Morris MK, Saez-Rodriguez J, Lauffenburger DA, Alexopoulos LG. Mitsos A, et al. Among authors: alexopoulos lg. PLoS One. 2012;7(11):e50085. doi: 10.1371/journal.pone.0050085. Epub 2012 Nov 30. PLoS One. 2012. PMID: 23226239 Free PMC article.

9

Discrete logic modelling as a means to link protein signalling networks with functional analysis of mammalian signal transduction.

Saez-Rodriguez J, Alexopoulos LG, Epperlein J, Samaga R, Lauffenburger DA, Klamt S, Sorger PK. Saez-Rodriguez J, et al. Among authors: alexopoulos lg. Mol Syst Biol. 2009;5:331. doi: 10.1038/msb.2009.87. Epub 2009 Dec 1. Mol Syst Biol. 2009. PMID: 19953085 Free PMC article.

10

A multipathway phosphoproteomic signaling network model of idiosyncratic drug- and inflammatory cytokine-induced toxicity in human hepatocytes.

Cosgrove BD, Alexopoulos LG, Saez-Rodriguez J, Griffith LG, Lauffenburger DA. Cosgrove BD, et al. Among authors: alexopoulos lg. Annu Int Conf IEEE Eng Med Biol Soc. 2009;2009:5452-5. doi: 10.1109/IEMBS.2009.5334019. Annu Int Conf IEEE Eng Med Biol Soc. 2009. PMID: 19964679 Free PMC article.

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