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Identifying Genotype-Phenotype Correlations via Integrative Mutation Analysis.
Methods Mol Biol. 2021;2190:1-32. doi: 10.1007/978-1-0716-0826-5_1.
Methods Mol Biol. 2021.
PMID: 32804359
pdCSM-cancer: Using Graph-Based Signatures to Identify Small Molecules with Anticancer Properties.
Al-Jarf R, de Sá AGC, Pires DEV, Ascher DB.
Al-Jarf R, et al.
J Chem Inf Model. 2021 Jul 26;61(7):3314-3322. doi: 10.1021/acs.jcim.1c00168. Epub 2021 Jul 2.
J Chem Inf Model. 2021.
PMID: 34213323
Free PMC article.
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Understanding and predicting the functional consequences of missense mutations in BRCA1 and BRCA2.
Aljarf R, Shen M, Pires DEV, Ascher DB.
Aljarf R, et al.
Sci Rep. 2022 Jun 21;12(1):10458. doi: 10.1038/s41598-022-13508-3.
Sci Rep. 2022.
PMID: 35729312
Free PMC article.
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cardioToxCSM: A Web Server for Predicting Cardiotoxicity of Small Molecules.
Iftkhar S, de Sá AGC, Velloso JPL, Aljarf R, Pires DEV, Ascher DB.
Iftkhar S, et al.
J Chem Inf Model. 2022 Oct 24;62(20):4827-4836. doi: 10.1021/acs.jcim.2c00822. Epub 2022 Oct 11.
J Chem Inf Model. 2022.
PMID: 36219164
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kinCSM: Using graph-based signatures to predict small molecule CDK2 inhibitors.
Zhou Y, Al-Jarf R, Alavi A, Nguyen TB, Rodrigues CHM, Pires DEV, Ascher DB.
Zhou Y, et al. Among authors: al jarf r.
Protein Sci. 2022 Nov;31(11):e4453. doi: 10.1002/pro.4453.
Protein Sci. 2022.
PMID: 36305769
Free PMC article.
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embryoTox: Using Graph-Based Signatures to Predict the Teratogenicity of Small Molecules.
Aljarf R, Tang S, Pires DEV, Ascher DB.
Aljarf R, et al.
J Chem Inf Model. 2023 Jan 23;63(2):432-441. doi: 10.1021/acs.jcim.2c00824. Epub 2023 Jan 3.
J Chem Inf Model. 2023.
PMID: 36595441
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Uncovering the Molecular Drivers of NHEJ DNA Repair-Implicated Missense Variants and Their Functional Consequences.
Al-Jarf R, Karmakar M, Myung Y, Ascher DB.
Al-Jarf R, et al.
Genes (Basel). 2023 Sep 29;14(10):1890. doi: 10.3390/genes14101890.
Genes (Basel). 2023.
PMID: 37895239
Free PMC article.
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