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The genome sequence of segmental allotetraploid peanut Arachis hypogaea.
Bertioli DJ, Jenkins J, Clevenger J, Dudchenko O, Gao D, Seijo G, Leal-Bertioli SCM, Ren L, Farmer AD, Pandey MK, Samoluk SS, Abernathy B, Agarwal G, Ballén-Taborda C, Cameron C, Campbell J, Chavarro C, Chitikineni A, Chu Y, Dash S, El Baidouri M, Guo B, Huang W, Kim KD, Korani W, Lanciano S, Lui CG, Mirouze M, Moretzsohn MC, Pham M, Shin JH, Shirasawa K, Sinharoy S, Sreedasyam A, Weeks NT, Zhang X, Zheng Z, Sun Z, Froenicke L, Aiden EL, Michelmore R, Varshney RK, Holbrook CC, Cannon EKS, Scheffler BE, Grimwood J, Ozias-Akins P, Cannon SB, Jackson SA, Schmutz J. Bertioli DJ, et al. Among authors: el baidouri m, aiden el. Nat Genet. 2019 May;51(5):877-884. doi: 10.1038/s41588-019-0405-z. Epub 2019 May 1. Nat Genet. 2019. PMID: 31043755
Canfam_GSD: De novo chromosome-length genome assembly of the German Shepherd Dog (Canis lupus familiaris) using a combination of long reads, optical mapping, and Hi-C.
Field MA, Rosen BD, Dudchenko O, Chan EKF, Minoche AE, Edwards RJ, Barton K, Lyons RJ, Tuipulotu DE, Hayes VM, D Omer A, Colaric Z, Keilwagen J, Skvortsova K, Bogdanovic O, Smith MA, Aiden EL, Smith TPL, Zammit RA, Ballard JWO. Field MA, et al. Among authors: aiden el. Gigascience. 2020 Apr 1;9(4):giaa027. doi: 10.1093/gigascience/giaa027. Gigascience. 2020. PMID: 32236524 Free PMC article.
A pan-genome and chromosome-length reference genome of narrow-leafed lupin (Lupinus angustifolius) reveals genomic diversity and insights into key industry and biological traits.
Garg G, Kamphuis LG, Bayer PE, Kaur P, Dudchenko O, Taylor CM, Frick KM, Foley RC, Gao LL, Aiden EL, Edwards D, Singh KB. Garg G, et al. Among authors: aiden el. Plant J. 2022 Sep;111(5):1252-1266. doi: 10.1111/tpj.15885. Epub 2022 Aug 11. Plant J. 2022. PMID: 35779281 Free PMC article.
A Chromosome-Length Reference Genome for the Endangered Pacific Pocket Mouse Reveals Recent Inbreeding in a Historically Large Population.
Wilder AP, Dudchenko O, Curry C, Korody M, Turbek SP, Daly M, Misuraca A, Wang G, Khan R, Weisz D, Fronczek J, Aiden EL, Houck ML, Shier DM, Ryder OA, Steiner CC. Wilder AP, et al. Among authors: aiden el. Genome Biol Evol. 2022 Aug 3;14(8):evac122. doi: 10.1093/gbe/evac122. Genome Biol Evol. 2022. PMID: 35894178 Free PMC article.
Chromosome-length genome assemblies of six legume species provide insights into genome organization, evolution, and agronomic traits for crop improvement.
Garg V, Dudchenko O, Wang J, Khan AW, Gupta S, Kaur P, Han K, Saxena RK, Kale SM, Pham M, Yu J, Chitikineni A, Zhang Z, Fan G, Lui C, Valluri V, Meng F, Bhandari A, Liu X, Yang T, Chen H, Valliyodan B, Roorkiwal M, Shi C, Yang HB, Durand NC, Pandey MK, Li G, Barmukh R, Wang X, Chen X, Lam HM, Jiang H, Zong X, Liang X, Liu X, Liao B, Guo B, Jackson S, Nguyen HT, Zhuang W, Shubo W, Wang X, Aiden EL, Bennetzen JL, Varshney RK. Garg V, et al. Among authors: aiden el. J Adv Res. 2022 Dec;42:315-329. doi: 10.1016/j.jare.2021.10.009. Epub 2021 Nov 3. J Adv Res. 2022. PMID: 36513421 Free PMC article.
74 results