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Quality control requirements for the correct annotation of lipidomics data.
Köfeler HC, Eichmann TO, Ahrends R, Bowden JA, Danne-Rasche N, Dennis EA, Fedorova M, Griffiths WJ, Han X, Hartler J, Holčapek M, Jirásko R, Koelmel JP, Ejsing CS, Liebisch G, Ni Z, O'Donnell VB, Quehenberger O, Schwudke D, Shevchenko A, Wakelam MJO, Wenk MR, Wolrab D, Ekroos K. Köfeler HC, et al. Among authors: ahrends r. Nat Commun. 2021 Aug 6;12(1):4771. doi: 10.1038/s41467-021-24984-y. Nat Commun. 2021. PMID: 34362906 Free PMC article. No abstract available.
Lipidomics informatics for life-science.
Schwudke D, Shevchenko A, Hoffmann N, Ahrends R. Schwudke D, et al. Among authors: ahrends r. J Biotechnol. 2017 Nov 10;261:131-136. doi: 10.1016/j.jbiotec.2017.08.010. Epub 2017 Aug 16. J Biotechnol. 2017. PMID: 28822794 Review.
LipidCreator workbench to probe the lipidomic landscape.
Peng B, Kopczynski D, Pratt BS, Ejsing CS, Burla B, Hermansson M, Benke PI, Tan SH, Chan MY, Torta F, Schwudke D, Meckelmann SW, Coman C, Schmitz OJ, MacLean B, Manke MC, Borst O, Wenk MR, Hoffmann N, Ahrends R. Peng B, et al. Among authors: ahrends r. Nat Commun. 2020 Apr 28;11(1):2057. doi: 10.1038/s41467-020-15960-z. Nat Commun. 2020. PMID: 32345972 Free PMC article.
Simple Targeted Assays for Metabolic Pathways and Signaling: A Powerful Tool for Targeted Proteomics.
Kopczynski D, Hentschel A, Coman C, Schebb NH, Hornemann T, Mashek DG, Hartung NM, Shevchuk O, Schött HF, Lorenz K, Torta F, Burla B, Zahedi RP, Sickmann A, Kreutz MR, Ejsing CS, Medenbach J, Ahrends R. Kopczynski D, et al. Among authors: ahrends r. Anal Chem. 2020 Oct 20;92(20):13672-13676. doi: 10.1021/acs.analchem.0c02793. Epub 2020 Sep 21. Anal Chem. 2020. PMID: 32865986 Free PMC article.
Recommendations for good practice in MS-based lipidomics.
Köfeler HC, Ahrends R, Baker ES, Ekroos K, Han X, Hoffmann N, Holčapek M, Wenk MR, Liebisch G. Köfeler HC, et al. Among authors: ahrends r. J Lipid Res. 2021;62:100138. doi: 10.1016/j.jlr.2021.100138. Epub 2021 Oct 16. J Lipid Res. 2021. PMID: 34662536 Free PMC article. Review.
Lipidomic profiling of human serum enables detection of pancreatic cancer.
Wolrab D, Jirásko R, Cífková E, Höring M, Mei D, Chocholoušková M, Peterka O, Idkowiak J, Hrnčiarová T, Kuchař L, Ahrends R, Brumarová R, Friedecký D, Vivo-Truyols G, Škrha P, Škrha J, Kučera R, Melichar B, Liebisch G, Burkhardt R, Wenk MR, Cazenave-Gassiot A, Karásek P, Novotný I, Greplová K, Hrstka R, Holčapek M. Wolrab D, et al. Among authors: ahrends r. Nat Commun. 2022 Jan 10;13(1):124. doi: 10.1038/s41467-021-27765-9. Nat Commun. 2022. PMID: 35013261 Free PMC article.
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