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Species-Level Profiling of Ixodes pacificus Bacterial Microbiomes Reveals High Variability Across Short Spatial Scales at Different Taxonomic Resolutions.
Socarras KM, Earl JP, Krol JE, Bhat A, Pabilonia M, Harrison MH, Lang SP, Sen B, Ahmed A, Hester M, Mell JC, Vandegrift K, Ehrlich GD. Socarras KM, et al. Among authors: ahmed a. Genet Test Mol Biomarkers. 2021 Aug;25(8):551-562. doi: 10.1089/gtmb.2021.0088. Genet Test Mol Biomarkers. 2021. PMID: 34406842 Free PMC article.
Construction and characterization of a highly redundant Pseudomonas aeruginosa genomic library prepared from 12 clinical isolates: application to studies of gene distribution among populations.
Erdos G, Sayeed S, Hu FZ, Antalis PT, Shen K, Hayes JD, Ahmed AI, Johnson SL, Post JC, Ehrlich GD. Erdos G, et al. Int J Pediatr Otorhinolaryngol. 2006 Nov;70(11):1891-900. doi: 10.1016/j.ijporl.2006.06.016. Epub 2006 Aug 8. Int J Pediatr Otorhinolaryngol. 2006. PMID: 16899304 Free PMC article.
Comparative supragenomic analyses among the pathogens Staphylococcus aureus, Streptococcus pneumoniae, and Haemophilus influenzae using a modification of the finite supragenome model.
Boissy R, Ahmed A, Janto B, Earl J, Hall BG, Hogg JS, Pusch GD, Hiller LN, Powell E, Hayes J, Yu S, Kathju S, Stoodley P, Post JC, Ehrlich GD, Hu FZ. Boissy R, et al. Among authors: ahmed a. BMC Genomics. 2011 Apr 13;12:187. doi: 10.1186/1471-2164-12-187. BMC Genomics. 2011. PMID: 21489287 Free PMC article.
Genome of alkaliphilic Bacillus pseudofirmus OF4 reveals adaptations that support the ability to grow in an external pH range from 7.5 to 11.4.
Janto B, Ahmed A, Ito M, Liu J, Hicks DB, Pagni S, Fackelmayer OJ, Smith TA, Earl J, Elbourne LD, Hassan K, Paulsen IT, Kolstø AB, Tourasse NJ, Ehrlich GD, Boissy R, Ivey DM, Li G, Xue Y, Ma Y, Hu FZ, Krulwich TA. Janto B, et al. Among authors: ahmed a. Environ Microbiol. 2011 Dec;13(12):3289-309. doi: 10.1111/j.1462-2920.2011.02591.x. Epub 2011 Sep 27. Environ Microbiol. 2011. PMID: 21951522 Free PMC article.
Differences in genotype and virulence among four multidrug-resistant Streptococcus pneumoniae isolates belonging to the PMEN1 clone.
Hiller NL, Eutsey RA, Powell E, Earl JP, Janto B, Martin DP, Dawid S, Ahmed A, Longwell MJ, Dahlgren ME, Ezzo S, Tettelin H, Daugherty SC, Mitchell TJ, Hillman TA, Buchinsky FJ, Tomasz A, de Lencastre H, Sá-Leão R, Post JC, Hu FZ, Ehrlich GD. Hiller NL, et al. Among authors: ahmed a. PLoS One. 2011;6(12):e28850. doi: 10.1371/journal.pone.0028850. Epub 2011 Dec 19. PLoS One. 2011. PMID: 22205975 Free PMC article.
Comparative genomic analyses of 17 clinical isolates of Gardnerella vaginalis provide evidence of multiple genetically isolated clades consistent with subspeciation into genovars.
Ahmed A, Earl J, Retchless A, Hillier SL, Rabe LK, Cherpes TL, Powell E, Janto B, Eutsey R, Hiller NL, Boissy R, Dahlgren ME, Hall BG, Costerton JW, Post JC, Hu FZ, Ehrlich GD. Ahmed A, et al. J Bacteriol. 2012 Aug;194(15):3922-37. doi: 10.1128/JB.00056-12. Epub 2012 May 18. J Bacteriol. 2012. PMID: 22609915 Free PMC article.
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