Agarwal PK - Search Results

1

Future COVID19 surges prediction based on SARS-CoV-2 mutations surveillance.

Najar FZ, Linde E, Murphy CL, Borin VA, Wang H, Haider S, Agarwal PK. Najar FZ, et al. Among authors: agarwal pk. Elife. 2023 Jan 19;12:e82980. doi: 10.7554/eLife.82980. Elife. 2023. PMID: 36655992 Free PMC article.

2

Emerging variants of SARS-CoV-2 NSP10 highlight strong functional conservation of its binding to two non-structural proteins, NSP14 and NSP16.

Wang H, Rizvi SRA, Dong D, Lou J, Wang Q, Sopipong W, Su Y, Najar F, Agarwal PK, Kozielski F, Haider S. Wang H, et al. Among authors: agarwal pk. Elife. 2023 Dec 21;12:RP87884. doi: 10.7554/eLife.87884. Elife. 2023. PMID: 38127066 Free PMC article.

3

AP-endonuclease 1 sculpts DNA through an anchoring tyrosine residue on the DNA intercalating loop.

Hoitsma NM, Whitaker AM, Beckwitt EC, Jang S, Agarwal PK, Van Houten B, Freudenthal BD. Hoitsma NM, et al. Among authors: agarwal pk. Nucleic Acids Res. 2020 Jul 27;48(13):7345-7355. doi: 10.1093/nar/gkaa496. Nucleic Acids Res. 2020. PMID: 32542366 Free PMC article.

4

Visualizing Rev1 catalyze protein-template DNA synthesis.

Weaver TM, Cortez LM, Khoang TH, Washington MT, Agarwal PK, Freudenthal BD. Weaver TM, et al. Among authors: agarwal pk. Proc Natl Acad Sci U S A. 2020 Oct 13;117(41):25494-25504. doi: 10.1073/pnas.2010484117. Epub 2020 Sep 30. Proc Natl Acad Sci U S A. 2020. PMID: 32999062 Free PMC article.

5

Mechanism of nucleotide discrimination by the translesion synthesis polymerase Rev1.

Weaver TM, Click TH, Khoang TH, Todd Washington M, Agarwal PK, Freudenthal BD. Weaver TM, et al. Among authors: agarwal pk. Nat Commun. 2022 May 24;13(1):2876. doi: 10.1038/s41467-022-30577-0. Nat Commun. 2022. PMID: 35610266 Free PMC article.

6

Engineering Dynamic Surface Peptide Networks on Butyrylcholinesterase_G117H for Enhanced Organophosphosphorus Anticholinesterase Catalysis.

Hester KP, Bhattarai K, Jiang H, Agarwal PK, Pope C. Hester KP, et al. Among authors: agarwal pk. Chem Res Toxicol. 2019 Sep 16;32(9):1801-1810. doi: 10.1021/acs.chemrestox.9b00146. Epub 2019 Aug 28. Chem Res Toxicol. 2019. PMID: 31411024 Free PMC article.

7

On the Case of the Misplaced Hydrogens.

Kumar P, Agarwal PK, Cuneo MJ. Kumar P, et al. Among authors: agarwal pk. Chembiochem. 2021 Jan 15;22(2):288-297. doi: 10.1002/cbic.202000376. Epub 2020 Aug 28. Chembiochem. 2021. PMID: 32706524 Free PMC article. Review.

8

Enzyme dynamics: Looking beyond a single structure.

Agarwal PK, Bernard DN, Bafna K, Doucet N. Agarwal PK, et al. ChemCatChem. 2020 Oct 6;12(19):4704-4720. doi: 10.1002/cctc.202000665. Epub 2020 Jun 26. ChemCatChem. 2020. PMID: 33897908 Free PMC article.

9

Modulating Enzyme Function via Dynamic Allostery within Biliverdin Reductase B.

Redzic JS, Duff MR, Blue A, Pitts TM, Agarwal P, Eisenmesser EZ. Redzic JS, et al. Front Mol Biosci. 2021 May 20;8:691208. doi: 10.3389/fmolb.2021.691208. eCollection 2021. Front Mol Biosci. 2021. PMID: 34095235 Free PMC article.

10

Altered APE1 activity on abasic ribonucleotides is mediated by changes in the nucleoside sugar pucker.

Hoitsma NM, Click TH, Agarwal PK, Freudenthal BD. Hoitsma NM, et al. Among authors: agarwal pk. Comput Struct Biotechnol J. 2021 May 25;19:3293-3302. doi: 10.1016/j.csbj.2021.05.035. eCollection 2021. Comput Struct Biotechnol J. 2021. PMID: 34188778 Free PMC article.

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