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Mitochondrial RNA editing in Trypanoplasma borreli: New tools, new revelations.
Comput Struct Biotechnol J. 2022 Nov 14;20:6388-6402. doi: 10.1016/j.csbj.2022.11.023. eCollection 2022.
Comput Struct Biotechnol J. 2022.
PMID: 36420151
Free PMC article.
Complete minicircle genome of Leptomonas pyrrhocoris reveals sources of its non-canonical mitochondrial RNA editing events.
Gerasimov ES, Gasparyan AA, Afonin DA, Zimmer SL, Kraeva N, Lukeš J, Yurchenko V, Kolesnikov A.
Gerasimov ES, et al. Among authors: afonin da.
Nucleic Acids Res. 2021 Apr 6;49(6):3354-3370. doi: 10.1093/nar/gkab114.
Nucleic Acids Res. 2021.
PMID: 33660779
Free PMC article.
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Blastocrithidia nonstop mitochondrial genome and its expression are remarkably insulated from nuclear codon reassignment.
Afonin DA, Gerasimov ES, Škodová-Sveráková I, Záhonová K, Gahura O, Albanaz ATS, Myšková E, Bykova A, Paris Z, Lukeš J, Opperdoes FR, Horváth A, Zimmer SL, Yurchenko V.
Afonin DA, et al.
Nucleic Acids Res. 2024 Apr 24;52(7):3870-3885. doi: 10.1093/nar/gkae168.
Nucleic Acids Res. 2024.
PMID: 38452217
Free PMC article.
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Epigallocatechin Gallate Affects the Structure of Chromatosomes, Nucleosomes and Their Complexes with PARP1.
Andreeva TV, Maluchenko NV, Efremenko AV, Lyubitelev AV, Korovina AN, Afonin DA, Kirpichnikov MP, Studitsky VM, Feofanov AV.
Andreeva TV, et al. Among authors: afonin da.
Int J Mol Sci. 2023 Sep 16;24(18):14187. doi: 10.3390/ijms241814187.
Int J Mol Sci. 2023.
PMID: 37762491
Free PMC article.
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Interactions of Nucleosomes with Acidic Patch-Binding Peptides: A Combined Structural Bioinformatics, Molecular Modeling, Fluorescence Polarization, and Single-Molecule FRET Study.
Oleinikov PD, Fedulova AS, Armeev GA, Motorin NA, Singh-Palchevskaia L, Sivkina AL, Feskin PG, Glukhov GS, Afonin DA, Komarova GA, Kirpichnikov MP, Studitsky VM, Feofanov AV, Shaytan AK.
Oleinikov PD, et al. Among authors: afonin da.
Int J Mol Sci. 2023 Oct 14;24(20):15194. doi: 10.3390/ijms242015194.
Int J Mol Sci. 2023.
PMID: 37894874
Free PMC article.
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[The development of the method for the determination of the low-molecular weight alcohol content in the specimens of the biological materials].
Afonin DA, Khatuntsev SV, Vinogradova OV, Gorbacheva TV.
Afonin DA, et al.
Sud Med Ekspert. 2017;60(4):29-33. doi: 10.17116/sudmed201760329-33.
Sud Med Ekspert. 2017.
PMID: 28766526
Russian.
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