Abraham D - Search Results

1

Curation, integration and visualization of bacterial virulence factors in PATRIC.

Mao C, Abraham D, Wattam AR, Wilson MJ, Shukla M, Yoo HS, Sobral BW. Mao C, et al. Among authors: abraham d. Bioinformatics. 2015 Jan 15;31(2):252-8. doi: 10.1093/bioinformatics/btu631. Epub 2014 Sep 30. Bioinformatics. 2015. PMID: 25273106 Free PMC article.

2

PATRIC, the bacterial bioinformatics database and analysis resource.

Wattam AR, Abraham D, Dalay O, Disz TL, Driscoll T, Gabbard JL, Gillespie JJ, Gough R, Hix D, Kenyon R, Machi D, Mao C, Nordberg EK, Olson R, Overbeek R, Pusch GD, Shukla M, Schulman J, Stevens RL, Sullivan DE, Vonstein V, Warren A, Will R, Wilson MJ, Yoo HS, Zhang C, Zhang Y, Sobral BW. Wattam AR, et al. Among authors: abraham d. Nucleic Acids Res. 2014 Jan;42(Database issue):D581-91. doi: 10.1093/nar/gkt1099. Epub 2013 Nov 12. Nucleic Acids Res. 2014. PMID: 24225323 Free PMC article.

3

JunB mediates enhancer/promoter activity of COL1A2 following TGF-beta induction.

Ponticos M, Harvey C, Ikeda T, Abraham D, Bou-Gharios G. Ponticos M, et al. Among authors: abraham d. Nucleic Acids Res. 2009 Sep;37(16):5378-89. doi: 10.1093/nar/gkp544. Epub 2009 Jun 26. Nucleic Acids Res. 2009. PMID: 19561194 Free PMC article.

4

Pivotal role of connective tissue growth factor in lung fibrosis: MAPK-dependent transcriptional activation of type I collagen.

Ponticos M, Holmes AM, Shi-wen X, Leoni P, Khan K, Rajkumar VS, Hoyles RK, Bou-Gharios G, Black CM, Denton CP, Abraham DJ, Leask A, Lindahl GE. Ponticos M, et al. Arthritis Rheum. 2009 Jul;60(7):2142-55. doi: 10.1002/art.24620. Arthritis Rheum. 2009. PMID: 19565505 Free article.

5

Failed degradation of JunB contributes to overproduction of type I collagen and development of dermal fibrosis in patients with systemic sclerosis.

Ponticos M, Papaioannou I, Xu S, Holmes AM, Khan K, Denton CP, Bou-Gharios G, Abraham DJ. Ponticos M, et al. Arthritis Rheumatol. 2015 Jan;67(1):243-53. doi: 10.1002/art.38897. Arthritis Rheumatol. 2015. PMID: 25303440 Free PMC article.

6

STAT3 controls COL1A2 enhancer activation cooperatively with JunB, regulates type I collagen synthesis posttranscriptionally, and is essential for lung myofibroblast differentiation.

Papaioannou I, Xu S, Denton CP, Abraham DJ, Ponticos M. Papaioannou I, et al. Mol Biol Cell. 2018 Jan 15;29(2):84-95. doi: 10.1091/mbc.E17-06-0342. Epub 2017 Nov 15. Mol Biol Cell. 2018. PMID: 29142074 Free PMC article.

7

Col1a2 enhancer regulates collagen activity during development and in adult tissue repair.

Ponticos M, Abraham D, Alexakis C, Lu QL, Black C, Partridge T, Bou-Gharios G. Ponticos M, et al. Among authors: abraham d. Matrix Biol. 2004 Feb;22(8):619-28. doi: 10.1016/j.matbio.2003.12.002. Matrix Biol. 2004. PMID: 15062855

8

Prostacyclin derivatives prevent the fibrotic response to TGF-beta by inhibiting the Ras/MEK/ERK pathway.

Stratton R, Rajkumar V, Ponticos M, Nichols B, Shiwen X, Black CM, Abraham DJ, Leask A. Stratton R, et al. FASEB J. 2002 Dec;16(14):1949-51. doi: 10.1096/fj.02-0204fje. Epub 2002 Oct 4. FASEB J. 2002. PMID: 12368229

9

Regulation of collagen type I in vascular smooth muscle cells by competition between Nkx2.5 and deltaEF1/ZEB1.

Ponticos M, Partridge T, Black CM, Abraham DJ, Bou-Gharios G. Ponticos M, et al. Mol Cell Biol. 2004 Jul;24(14):6151-61. doi: 10.1128/MCB.24.14.6151-6161.2004. Mol Cell Biol. 2004. PMID: 15226419 Free PMC article.

10

Activation of key profibrotic mechanisms in transgenic fibroblasts expressing kinase-deficient type II Transforming growth factor-{beta} receptor (T{beta}RII{delta}k).

Denton CP, Lindahl GE, Khan K, Shiwen X, Ong VH, Gaspar NJ, Lazaridis K, Edwards DR, Leask A, Eastwood M, Leoni P, Renzoni EA, Bou Gharios G, Abraham DJ, Black CM. Denton CP, et al. J Biol Chem. 2005 Apr 22;280(16):16053-65. doi: 10.1074/jbc.M413134200. Epub 2005 Feb 11. J Biol Chem. 2005. PMID: 15708853 Free article.

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