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A pile of pipelines: An overview of the bioinformatics software for metabarcoding data analyses.
Mol Ecol Resour. 2023 Aug 7:10.1111/1755-0998.13847. doi: 10.1111/1755-0998.13847. Online ahead of print.
Mol Ecol Resour. 2023.
PMID: 37548515
Cascabel: A Scalable and Versatile Amplicon Sequence Data Analysis Pipeline Delivering Reproducible and Documented Results.
Abdala Asbun A, Besseling MA, Balzano S, van Bleijswijk JDL, Witte HJ, Villanueva L, Engelmann JC.
Abdala Asbun A, et al.
Front Genet. 2020 Nov 20;11:489357. doi: 10.3389/fgene.2020.489357. eCollection 2020.
Front Genet. 2020.
PMID: 33329686
Free PMC article.
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Microbial Communities on Plastic Polymers in the Mediterranean Sea.
Vaksmaa A, Knittel K, Abdala Asbun A, Goudriaan M, Ellrott A, Witte HJ, Vollmer I, Meirer F, Lott C, Weber M, Engelmann JC, Niemann H.
Vaksmaa A, et al. Among authors: abdala asbun a.
Front Microbiol. 2021 Jun 16;12:673553. doi: 10.3389/fmicb.2021.673553. eCollection 2021.
Front Microbiol. 2021.
PMID: 34220756
Free PMC article.
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Methane oxidation in anoxic lake water stimulated by nitrate and sulfate addition.
van Grinsven S, Sinninghe Damsté JS, Abdala Asbun A, Engelmann JC, Harrison J, Villanueva L.
van Grinsven S, et al. Among authors: abdala asbun a.
Environ Microbiol. 2020 Feb;22(2):766-782. doi: 10.1111/1462-2920.14886. Epub 2020 Jan 1.
Environ Microbiol. 2020.
PMID: 31814267
Free PMC article.
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Disentangling the lipid divide: Identification of key enzymes for the biosynthesis of membrane-spanning and ether lipids in Bacteria.
Sahonero-Canavesi DX, Siliakus MF, Abdala Asbun A, Koenen M, von Meijenfeldt FAB, Boeren S, Bale NJ, Engelman JC, Fiege K, Strack van Schijndel L, Sinninghe Damsté JS, Villanueva L.
Sahonero-Canavesi DX, et al. Among authors: abdala asbun a.
Sci Adv. 2022 Dec 16;8(50):eabq8652. doi: 10.1126/sciadv.abq8652. Epub 2022 Dec 16.
Sci Adv. 2022.
PMID: 36525503
Free article.
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