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The chromatin accessibility dynamics during cell fate specifications in zebrafish early embryogenesis.
Xu Q, Zhang Y, Xu W, Liu D, Jin W, Chen X, Hong N. Xu Q, et al. Nucleic Acids Res. 2024 Apr 12;52(6):3106-3120. doi: 10.1093/nar/gkae095. Nucleic Acids Res. 2024. PMID: 38364856 Free PMC article.
We investigated several important time points immediately after zygotic genome activation (ZGA), covering key developmental stages up to dome. The results revealed key chromatin signatures in the first cell fate specifications when cells start to differentiate into …
We investigated several important time points immediately after zygotic genome activation (ZGA), covering key developmental stages up …
Ribocentre-switch: a database of riboswitches.
Bu F, Lin X, Liao W, Lu Z, He Y, Luo Y, Peng X, Li M, Huang Y, Chen X, Xiao B, Jiang J, Deng J, Huang J, Lin T, Miao Z, Huang L. Bu F, et al. Nucleic Acids Res. 2024 Jan 5;52(D1):D265-D272. doi: 10.1093/nar/gkad891. Nucleic Acids Res. 2024. PMID: 37855663 Free PMC article.
Computational Pipeline for Reference-Free Comparative Analysis of RNA 3D Structures Applied to SARS-CoV-2 UTR Models.
Gumna J, Antczak M, Adamiak RW, Bujnicki JM, Chen SJ, Ding F, Ghosh P, Li J, Mukherjee S, Nithin C, Pachulska-Wieczorek K, Ponce-Salvatierra A, Popenda M, Sarzynska J, Wirecki T, Zhang D, Zhang S, Zok T, Westhof E, Miao Z, Szachniuk M, Rybarczyk A. Gumna J, et al. Int J Mol Sci. 2022 Aug 25;23(17):9630. doi: 10.3390/ijms23179630. Int J Mol Sci. 2022. PMID: 36077037 Free PMC article.