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2021 5
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2023 14
2024 3

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Spatial and temporal organization of the genome: Current state and future aims of the 4D nucleome project.
Dekker J, Alber F, Aufmkolk S, Beliveau BJ, Bruneau BG, Belmont AS, Bintu L, Boettiger A, Calandrelli R, Disteche CM, Gilbert DM, Gregor T, Hansen AS, Huang B, Huangfu D, Kalhor R, Leslie CS, Li W, Li Y, Ma J, Noble WS, Park PJ, Phillips-Cremins JE, Pollard KS, Rafelski SM, Ren B, Ruan Y, Shav-Tal Y, Shen Y, Shendure J, Shu X, Strambio-De-Castillia C, Vertii A, Zhang H, Zhong S. Dekker J, et al. Mol Cell. 2023 Aug 3;83(15):2624-2640. doi: 10.1016/j.molcel.2023.06.018. Epub 2023 Jul 6. Mol Cell. 2023. PMID: 37419111 Review.
Integrative approaches in genome structure analysis.
Boninsegna L, Yildirim A, Zhan Y, Alber F. Boninsegna L, et al. Structure. 2022 Jan 6;30(1):24-36. doi: 10.1016/j.str.2021.12.003. Epub 2021 Dec 27. Structure. 2022. PMID: 34963059 Free PMC article. Review.
Cost-effective methylome sequencing of cell-free DNA for accurately detecting and locating cancer.
Stackpole ML, Zeng W, Li S, Liu CC, Zhou Y, He S, Yeh A, Wang Z, Sun F, Li Q, Yuan Z, Yildirim A, Chen PJ, Winograd P, Tran B, Lee YT, Li PS, Noor Z, Yokomizo M, Ahuja P, Zhu Y, Tseng HR, Tomlinson JS, Garon E, French S, Magyar CE, Dry S, Lajonchere C, Geschwind D, Choi G, Saab S, Alber F, Wong WH, Dubinett SM, Aberle DR, Agopian V, Han SB, Ni X, Li W, Zhou XJ. Stackpole ML, et al. Nat Commun. 2022 Sep 29;13(1):5566. doi: 10.1038/s41467-022-32995-6. Nat Commun. 2022. PMID: 36175411 Free PMC article.
The 3D Genome Structure of Single Cells.
Zhou T, Zhang R, Ma J. Zhou T, et al. Annu Rev Biomed Data Sci. 2021 Jul 20;4:21-41. doi: 10.1146/annurev-biodatasci-020121-084709. Epub 2021 Apr 23. Annu Rev Biomed Data Sci. 2021. PMID: 34465168 Review.
SPIN reveals genome-wide landscape of nuclear compartmentalization.
Wang Y, Zhang Y, Zhang R, van Schaik T, Zhang L, Sasaki T, Peric-Hupkes D, Chen Y, Gilbert DM, van Steensel B, Belmont AS, Ma J. Wang Y, et al. Genome Biol. 2021 Jan 14;22(1):36. doi: 10.1186/s13059-020-02253-3. Genome Biol. 2021. PMID: 33446254 Free PMC article.
28 results