R01 GM109453/GM/NIGMS NIH HHS/United States[Grants and Funding] - Search Results

Year	Number of Results
2013	2
2015	2
2016	2
2017	6
2018	4
2019	2
2020	1
2021	2
2022	2
2023	2
2024	0

1

Zhang F, Li Q. Zhang F, et al. Comput Stat Data Anal. 2017 Dec;116:49-66. doi: 10.1016/j.csda.2017.07.005. Epub 2017 Jul 29. Comput Stat Data Anal. 2017. PMID: 29255337 Free PMC article.

2

Model-based assessment of replicability for genome-wide association meta-analysis.

McGuire D, Jiang Y, Liu M, Weissenkampen JD, Eckert S, Yang L, Chen F; GWAS and Sequencing Consortium of Alcohol and Nicotine Use (GSCAN); Berg A, Vrieze S, Jiang B, Li Q, Liu DJ. McGuire D, et al. Nat Commun. 2021 Mar 30;12(1):1964. doi: 10.1038/s41467-021-21226-z. Nat Commun. 2021. PMID: 33785739 Free PMC article.

3

RETROFIT: Reference-free deconvolution of cell-type mixtures in spatial transcriptomics.

Singh R, He X, Park AK, Hardison RC, Zhu X, Li Q. Singh R, et al. bioRxiv [Preprint]. 2023 Jun 9:2023.06.07.544126. doi: 10.1101/2023.06.07.544126. bioRxiv. 2023. PMID: 37333291 Free PMC article. Preprint.

4

Galaxy tools to study genome diversity.

Bedoya-Reina OC, Ratan A, Burhans R, Kim HL, Giardine B, Riemer C, Li Q, Olson TL, Loughran TP Jr, Vonholdt BM, Perry GH, Schuster SC, Miller W. Bedoya-Reina OC, et al. Gigascience. 2013 Dec 30;2(1):17. doi: 10.1186/2047-217X-2-17. Gigascience. 2013. PMID: 24377391 Free PMC article.

5

Measuring the reproducibility and quality of Hi-C data.

Yardımcı GG, Ozadam H, Sauria MEG, Ursu O, Yan KK, Yang T, Chakraborty A, Kaul A, Lajoie BR, Song F, Zhan Y, Ay F, Gerstein M, Kundaje A, Li Q, Taylor J, Yue F, Dekker J, Noble WS. Yardımcı GG, et al. Genome Biol. 2019 Mar 19;20(1):57. doi: 10.1186/s13059-019-1658-7. Genome Biol. 2019. PMID: 30890172 Free PMC article.

6

RNAseq studies reveal distinct transcriptional response to vitamin A deficiency in small intestine versus colon, uncovering novel vitamin A-regulated genes.

Chai Z, Lyu Y, Chen Q, Wei CH, Snyder LM, Weaver V, Sebastian A, Albert I, Li Q, Cantorna MT, Ross AC. Chai Z, et al. J Nutr Biochem. 2021 Dec;98:108814. doi: 10.1016/j.jnutbio.2021.108814. Epub 2021 Jul 6. J Nutr Biochem. 2021. PMID: 34242724 Free PMC article.

7

A regression framework for assessing covariate effects on the reproducibility of high-throughput experiments.

Li Q, Zhang F. Li Q, et al. Biometrics. 2018 Sep;74(3):803-813. doi: 10.1111/biom.12832. Epub 2017 Nov 29. Biometrics. 2018. PMID: 29192968 Free PMC article.

8

Multi-scale biological and physical modelling of the tumour micro-environment.

Kunz RF, Gaskin BJ, Li Q, Davanloo-Tajbakhsh S, Dong C. Kunz RF, et al. Drug Discov Today Dis Models. 2015 Summer;16:7-15. doi: 10.1016/j.ddmod.2015.03.001. Epub 2015 Jul 20. Drug Discov Today Dis Models. 2015. PMID: 31303886 Free PMC article.

9

Transcriptional Profiling of the Small Intestine and the Colon Reveals Modulation of Gut Infection with Citrobacter rodentium According to the Vitamin A Status.

Chai Z, Lyu Y, Chen Q, Wei CH, Snyder LM, Weaver V, Sebastian A, Albert I, Li Q, Cantorna MT, Ross C. Chai Z, et al. Nutrients. 2022 Apr 8;14(8):1563. doi: 10.3390/nu14081563. Nutrients. 2022. PMID: 35458125 Free PMC article.

10

S3norm: simultaneous normalization of sequencing depth and signal-to-noise ratio in epigenomic data.

Xiang G, Keller CA, Giardine B, An L, Li Q, Zhang Y, Hardison RC. Xiang G, et al. Nucleic Acids Res. 2020 May 7;48(8):e43. doi: 10.1093/nar/gkaa105. Nucleic Acids Res. 2020. PMID: 32086521 Free PMC article.

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