Natural languages and RNA virus evolution

J Physiol. 2024 Jun;602(11):2565-2580. doi: 10.1113/JP284415. Epub 2023 Nov 20.

Abstract

Information concepts from physics, mathematics and computer science support many areas of research in biology. Their focus is on objective information, which provides correlations and patterns related to objects, processes, marks and signals. In these approaches only the quantitative aspects of the meaning of the information is relevant. In other areas of biology, 'meaningful information', which is subjective in nature, relies on the physiology of the organism's sensory organs and on the interpretation of the perceived signals, which is then translated into action, even if this is only mental (in brained animals). Information is involved, in terms of both amount and quality. Here we contextualize and review the main theories that deal with 'meaningful-information' at a molecular level from different areas of natural language research, namely biosemiotics, code-biology, biocommunication and biohermeneutics. As this information mediates between the organism and its environment, we emphasize how such theories compare with the neo-Darwinian treatment of genetic information, and how they project onto the rapid evolution of RNA viruses.

Keywords: RNA archaeology; RNA virus; RNAse III; RNAse P; UV‐C‐light‐ribozyme; biocommunication; biosemiotics; viral quasispecies.

Publication types

  • Review

MeSH terms

  • Animals
  • Evolution, Molecular
  • Humans
  • RNA Viruses* / genetics
  • RNA Viruses* / physiology