GM 51501/GM/NIGMS NIH HHS/United States[Grants and Funding] - Search Results

Year	Number of Results
2001	2
2003	1
2004	2
2005	5
2008	1
2009	1
2010	1
2024	0

1

Huang N, MacKerell AD Jr. Huang N, et al. Philos Trans A Math Phys Eng Sci. 2004 Jul 15;362(1820):1439-60. doi: 10.1098/rsta.2004.1383. Philos Trans A Math Phys Eng Sci. 2004. PMID: 15306460 Review.

2

The structure of aqueous guanidinium chloride solutions.

Mason PE, Neilson GW, Enderby JE, Saboungi ML, Dempsey CE, MacKerell AD Jr, Brady JW. Mason PE, et al. J Am Chem Soc. 2004 Sep 22;126(37):11462-70. doi: 10.1021/ja040034x. J Am Chem Soc. 2004. PMID: 15366892

3

Polarizable empirical force field for alkanes based on the classical Drude oscillator model.

Vorobyov IV, Anisimov VM, MacKerell AD Jr. Vorobyov IV, et al. J Phys Chem B. 2005 Oct 13;109(40):18988-99. doi: 10.1021/jp053182y. J Phys Chem B. 2005. PMID: 16853445

4

Altered structural fluctuations in duplex RNA versus DNA: a conformational switch involving base pair opening.

Pan Y, MacKerell AD Jr. Pan Y, et al. Nucleic Acids Res. 2003 Dec 15;31(24):7131-40. doi: 10.1093/nar/gkg941. Nucleic Acids Res. 2003. PMID: 14654688 Free PMC article.

5

Cooperative binding of DNA and CBFbeta to the Runt domain of the CBFalpha studied via MD simulations.

Habtemariam B, Anisimov VM, MacKerell AD Jr. Habtemariam B, et al. Nucleic Acids Res. 2005 Jul 26;33(13):4212-22. doi: 10.1093/nar/gki724. Print 2005. Nucleic Acids Res. 2005. PMID: 16049027 Free PMC article.

6

Unexpected relative aqueous solubilities of a phosphotyrosine analogue and two phosphonate derivatives.

Boresch S, Leitgeb M, Beselman A, MacKerell AD Jr. Boresch S, et al. J Am Chem Soc. 2005 Apr 6;127(13):4640-8. doi: 10.1021/ja044935h. J Am Chem Soc. 2005. PMID: 15796529

7

Role of the adenine ligand on the stabilization of the secondary and tertiary interactions in the adenine riboswitch.

Priyakumar UD, MacKerell AD Jr. Priyakumar UD, et al. J Mol Biol. 2010 Mar 12;396(5):1422-38. doi: 10.1016/j.jmb.2009.12.024. Epub 2009 Dec 21. J Mol Biol. 2010. PMID: 20026131 Free PMC article.

8

Re-examination of the intrinsic, dynamic and hydration properties of phosphoramidate DNA.

Banavali NK, MacKerell AD. Banavali NK, et al. Nucleic Acids Res. 2001 Aug 1;29(15):3219-30. doi: 10.1093/nar/29.15.3219. Nucleic Acids Res. 2001. PMID: 11470880 Free PMC article.

9

Reevaluation of stereoelectronic contributions to the conformational properties of the phosphodiester and N3'-phosphoramidate moieties of nucleic acids.

Banavali NK, MacKerell AD Jr. Banavali NK, et al. J Am Chem Soc. 2001 Jul 18;123(28):6747-55. doi: 10.1021/ja010295w. J Am Chem Soc. 2001. PMID: 11448177

10

Conformational determinants of tandem GU mismatches in RNA: insights from molecular dynamics simulations and quantum mechanical calculations.

Pan Y, Priyakumar UD, MacKerell AD Jr. Pan Y, et al. Biochemistry. 2005 Feb 8;44(5):1433-43. doi: 10.1021/bi047932q. Biochemistry. 2005. PMID: 15683228

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