Detection of genetically diverse human immunodeficiency virus type 1 group M and O isolates by PCR

J Clin Microbiol. 1997 May;35(5):1284-6. doi: 10.1128/jcm.35.5.1284-1286.1997.

Abstract

A panel of 136 genetically diverse group M and 5 group O adult isolates from outside the United States and Europe were evaluated by PCR with the Roche AMPLICOR HIV-1 test, a modified version of the AMPLICOR HIV-1 test, and a new primer pair/probe system. Detection of some of these isolates was less efficient with the AMPLICOR HIV-1 test; however, the assay was significantly improved by reducing the sample input and lowering the annealing temperature. The new primer pair/probe set detected 140 of 141 isolates, including the 5 group O isolates that were not detected with either of the AMPLICOR HIV-1 test formats.

MeSH terms

  • Adult
  • Genetic Variation
  • Genome, Viral
  • HIV Infections / virology*
  • HIV-1 / genetics*
  • Humans
  • Molecular Sequence Data
  • Polymerase Chain Reaction / methods*

Associated data

  • GENBANK/K03455