GATA2 regulates the CAD susceptibility gene ADTRP rs6903956 through preferential interaction with the G allele

Mol Genet Genomics. 2021 Jul;296(4):799-808. doi: 10.1007/s00438-021-01782-1. Epub 2021 Apr 15.

Abstract

Myocardial infarction (MI) is a frequent outcome of coronary artery disease (CAD) and the key factor contributing to worldwide disability and death. Genetic factors contribute to the pathogenesis of CAD/MI, and SNP rs6903956 in the ADTRP gene was first found associated with CAD/MI in the Chinese Han population, which was successfully replicated in other cohorts. However, whether rs6903956 is a functional SNP and its risk mechanism to CAD/MI remains unknown. The ADTRP gene-encoded androgen-dependent TFPI regulating protein regulates vascular endothelial cell function, endothelial-monocyte adhesion, and thrombosis. The allele A of rs6903956, in particular, is associated with lower ADTRP mRNA levels in lymphocytes. In the current study, we found that SNP rs6903956 exhibits allelic differences in transcriptional activity by interacting with GATA2. Also, the A allele conferred a greater risk of CAD and MI, lowered transcriptional activity, and GATA2 binding ability as compared to the G allele. Our findings provide details on how rs6903956 regulates the expression of ADTRP and may provide novel insights into CAD pathology and susceptibility.

Keywords: ADTRP; Coronary artery disease; GATA2; MI; SNP rs6903956.

MeSH terms

  • Alleles
  • Cells, Cultured
  • Coronary Artery Disease / epidemiology
  • Coronary Artery Disease / genetics*
  • Epistasis, Genetic
  • GATA2 Transcription Factor / genetics*
  • GATA2 Transcription Factor / metabolism
  • Gene Expression Regulation
  • Gene Regulatory Networks
  • Genetic Predisposition to Disease
  • HeLa Cells
  • Human Umbilical Vein Endothelial Cells
  • Humans
  • Membrane Proteins / genetics*
  • Membrane Proteins / metabolism
  • Polymorphism, Single Nucleotide
  • Promoter Regions, Genetic
  • Protein Binding
  • Risk Factors

Substances

  • ADTRP protein, human
  • GATA2 Transcription Factor
  • GATA2 protein, human
  • Membrane Proteins