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Page 1
Genome editing using CRISPR/Cas9-based knock-in approaches in zebrafish.
Albadri S, Del Bene F, Revenu C. Albadri S, et al. Methods. 2017 May 15;121-122:77-85. doi: 10.1016/j.ymeth.2017.03.005. Epub 2017 Mar 12. Methods. 2017. PMID: 28300641 Review.
Therefore, with higher efficiency and insertion rate, NHEJ-based knock-in seems to be a promising approach to target endogenous loci and to circumvent the limitations of HDR whenever it is possible and appropriate. ...
Therefore, with higher efficiency and insertion rate, NHEJ-based knock-in seems to be a promising approach to target endogenous loci …
Chromatin Preparation and Chromatin Immunoprecipitation from Drosophila Heads.
Andrenacci D, Cernilogar FM. Andrenacci D, et al. Methods Mol Biol. 2023;2655:19-30. doi: 10.1007/978-1-0716-3143-0_2. Methods Mol Biol. 2023. PMID: 37212985
Therefore, from the amount of DNA recovered, it can be inferred the localization and abundance of the target protein at specific loci or throughout the entire genome. This protocol describes how to perform ChIP from Drosophila adult fly heads....
Therefore, from the amount of DNA recovered, it can be inferred the localization and abundance of the target protein at specific loci …
Impact of multiple sclerosis risk loci in postinfectious neurological syndromes.
Martinelli-Boneschi F, Currò R, Santoro S, Berzero G, Sorosina M, Ferrè L, Mascia E, Peroni S, Comi G, Gugliemi A, Vegezzi E, Callegari I, Filippi M, Cortese A, Esposito F, Clarelli F, Marchioni E. Martinelli-Boneschi F, et al. Mult Scler Relat Disord. 2020 Sep;44:102326. doi: 10.1016/j.msard.2020.102326. Epub 2020 Jun 24. Mult Scler Relat Disord. 2020. PMID: 32615529
A weighted genetic risk score (wGRS) has been calculated based on autosomal MS risk loci derived from large-scale studies, and an HLA genetic burden (HLAGB) was also calculated on loci associated to MS. ...
A weighted genetic risk score (wGRS) has been calculated based on autosomal MS risk loci derived from large-scale studies, and an HLA …
Stepwise recombination suppression around the mating-type locus in an ascomycete fungus with self-fertile spores.
Vittorelli N, Rodríguez de la Vega RC, Snirc A, Levert E, Gautier V, Lalanne C, De Filippo E, Gladieux P, Guillou S, Zhang Y, Tejomurthula S, Grigoriev IV, Debuchy R, Silar P, Giraud T, Hartmann FE. Vittorelli N, et al. PLoS Genet. 2023 Feb 10;19(2):e1010347. doi: 10.1371/journal.pgen.1010347. eCollection 2023 Feb. PLoS Genet. 2023. PMID: 36763677 Free PMC article.
Recombination is often suppressed at sex-determining loci in plants and animals, and at self-incompatibility or mating-type loci in plants and fungi. ...
Recombination is often suppressed at sex-determining loci in plants and animals, and at self-incompatibility or mating-type loci …
A multi-step genomic approach prioritized TBKBP1 gene as relevant for multiple sclerosis susceptibility.
Sorosina M, Barizzone N, Clarelli F, Anand S, Lupoli S, Salvi E, Mangano E, Bordoni R, Roostaei T, Mascia E, Zuccalà M, Vecchio D, Cavalla P, Santoro S, Ferrè L, Zollo A; PROGEMUS; Barlassina C, Cusi D, Martinelli V, Comi G, Leone M, Filippi M, Patsopoulos NA, De Jager PL, De Bellis G, Esposito F, D'Alfonso S, Martinelli Boneschi F. Sorosina M, et al. J Neurol. 2022 Aug;269(8):4510-4522. doi: 10.1007/s00415-022-11109-8. Epub 2022 May 12. J Neurol. 2022. PMID: 35545683 Free PMC article.
BACKGROUND: Over 200 genetic loci have been associated with multiple sclerosis (MS) explaining ~ 50% of its heritability, suggesting that additional mechanisms may account for the "missing heritability" phenomenon. ...RESULTS: Top associated signals overlap with already kn …
BACKGROUND: Over 200 genetic loci have been associated with multiple sclerosis (MS) explaining ~ 50% of its heritability, suggesting …
Lack of pathogenic mutations in six patients with MMPSI.
De Filippo MR, Rizzo F, Marchese G, Giurato G, Nassa G, Ravo M, Tarallo R, Pironti E, Vecchi M, Crichiutti G, Capizzi G, Verrotti A, Weisz A, Coppola G. De Filippo MR, et al. Epilepsy Res. 2014 Feb;108(2):340-4. doi: 10.1016/j.eplepsyres.2013.11.007. Epub 2013 Nov 16. Epilepsy Res. 2014. PMID: 24315024
Sequencing of the KCNT1, PLCB1, SCN1A and TBC1D24 loci was performed in six children with typical features of malignant migrating partial seizures of infancy (MMPSI), to verify the presence of potential disease-causing mutations, including those already reported to be asso …
Sequencing of the KCNT1, PLCB1, SCN1A and TBC1D24 loci was performed in six children with typical features of malignant migrating par …
Unexpected genetic integrity boosts hope for the conservation of the red-legged partridge (Alectoris rufa, Galliformes) in Italy.
Tanini D, Guerrini M, Vannini C, Barbanera F. Tanini D, et al. Zoology (Jena). 2022 Dec;155:126056. doi: 10.1016/j.zool.2022.126056. Epub 2022 Nov 15. Zoology (Jena). 2022. PMID: 36413830
We herein carried out an extended microsatellite DNA survey including additional 65 samples (total, 90) and six loci (total, 11) to determine both spatial structure and genetic integrity of local A. rufa. ...The two subpopulations should be treated as distinct Management U …
We herein carried out an extended microsatellite DNA survey including additional 65 samples (total, 90) and six loci (total, 11) to d …
Genomic and functional evaluation of TNFSF14 in multiple sclerosis susceptibility.
Zuccalà M, Barizzone N, Boggio E, Gigliotti L, Sorosina M, Basagni C, Bordoni R, Clarelli F, Anand S, Mangano E, Vecchio D, Corsetti E, Martire S, Perga S, Ferrante D, Gajofatto A, Ivashynka A, Solaro C, Cantello R, Martinelli V, Comi G, Filippi M, Esposito F, Leone M, De Bellis G, Dianzani U, Martinelli-Boneschi F, D'Alfonso S. Zuccalà M, et al. J Genet Genomics. 2021 Jun 20;48(6):497-507. doi: 10.1016/j.jgg.2021.03.017. Epub 2021 May 25. J Genet Genomics. 2021. PMID: 34353742
Recent Selection Changes in Human Genes under Long-Term Balancing Selection.
de Filippo C, Key FM, Ghirotto S, Benazzo A, Meneu JR, Weihmann A; NISC Comparative Sequence Program; Parra G, Green ED, Andrés AM. de Filippo C, et al. Mol Biol Evol. 2016 Jun;33(6):1435-47. doi: 10.1093/molbev/msw023. Epub 2016 Feb 1. Mol Biol Evol. 2016. PMID: 26831942 Free PMC article.
To better understand the role of previously balanced alleles in novel adaptations, we analyzed in detail four loci as case examples of this mechanism. These loci show hallmark signatures of long-term balancing selection in African populations, but not in Eurasian po …
To better understand the role of previously balanced alleles in novel adaptations, we analyzed in detail four loci as case examples o …
Genomic insights into shank and eggshell color in Italian local chickens.
Perini F, Cendron F, Lasagna E, Cassandro M, Penasa M. Perini F, et al. Poult Sci. 2024 Mar 21;103(6):103677. doi: 10.1016/j.psj.2024.103677. Online ahead of print. Poult Sci. 2024. PMID: 38593544 Free PMC article.
As regards shank color, the most interesting locus was detected on chromosome Z, close to the TYRP1 gene, known to play a key role in avian pigmentation. Additionally, several novel loci and genes associated with shank pigmentation, skin pigmentation, UV protection, and me …
As regards shank color, the most interesting locus was detected on chromosome Z, close to the TYRP1 gene, known to play a key role in avian …
23 results