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Did you mean building du (5,788 results)?
WRKY transcription factors and OBERON histone-binding proteins form complexes to balance plant growth and stress tolerance.
Du P, Wang Q, Yuan DY, Chen SS, Su YN, Li L, Chen S, He XJ. Du P, et al. EMBO J. 2023 Oct 4;42(19):e113639. doi: 10.15252/embj.2023113639. Epub 2023 Aug 11. EMBO J. 2023. PMID: 37565504 Free article.
We found that group IId WRKY transcription factors interact with OBERON (OBE) proteins, forming redundant WRKY-OBE complexes in Arabidopsis thaliana. The coiled-coil domain of WRKY transcription factors binds to OBE proteins and is responsible for target gene selection and …
We found that group IId WRKY transcription factors interact with OBERON (OBE) proteins, forming redundant WRKY-OBE complexes in Arabidopsis …
Mapping the proximity interaction network of the Rho-family GTPases reveals signalling pathways and regulatory mechanisms.
Bagci H, Sriskandarajah N, Robert A, Boulais J, Elkholi IE, Tran V, Lin ZY, Thibault MP, Dubé N, Faubert D, Hipfner DR, Gingras AC, Côté JF. Bagci H, et al. Nat Cell Biol. 2020 Jan;22(1):120-134. doi: 10.1038/s41556-019-0438-7. Epub 2019 Dec 23. Nat Cell Biol. 2020. PMID: 31871319
Guanine nucleotide exchange factors (RhoGEFs) and GTPase-activating proteins (RhoGAPs) coordinate the activation state of the Rho family of GTPases for binding to effectors. Here, we exploited proximity-dependent biotinylation to systematically define the Rho family proxim …
Guanine nucleotide exchange factors (RhoGEFs) and GTPase-activating proteins (RhoGAPs) coordinate the activation state of the Rho family of …
Enhancement of LacI binding in vivo.
Du M, Kodner S, Bai L. Du M, et al. Nucleic Acids Res. 2019 Oct 10;47(18):9609-9618. doi: 10.1093/nar/gkz698. Nucleic Acids Res. 2019. PMID: 31396617 Free PMC article.
In this work, we measured LacI binding in living yeast cells using a fluorescent repressor operator system and found an apparent Kd of 0.6 muM, four orders of magnitude higher than that in vitro. ...It turns out that the GFP tagging location and the fusion protein stabilit …
In this work, we measured LacI binding in living yeast cells using a fluorescent repressor operator system and found an apparent Kd o …
Ligand Binding Properties of Odorant-Binding Protein OBP5 from Mus musculus.
Moitrier L, Belloir C, Lalis M, Hou Y, Topin J, Briand L. Moitrier L, et al. Biology (Basel). 2022 Dec 20;12(1):2. doi: 10.3390/biology12010002. Biology (Basel). 2022. PMID: 36671695 Free PMC article.
Fluorescent experiments revealed that mOBP5 interacts with the fluorescent probe N-phenyl naphthylamine (NPN) with micromolar affinity. Competitive binding experiments with 40 odorants indicated that mOBP5 binds a restricted number of odorants with good affinity. Is …
Fluorescent experiments revealed that mOBP5 interacts with the fluorescent probe N-phenyl naphthylamine (NPN) with micromolar affinity. Comp …
The Role of JMY in p53 Regulation.
Adighibe O, Pezzella F. Adighibe O, et al. Cancers (Basel). 2018 May 31;10(6):173. doi: 10.3390/cancers10060173. Cancers (Basel). 2018. PMID: 29857553 Free PMC article. Review.
In event of DNA damage, JMY levels also upregulate in the nucleus where JMY forms a co-activator complex with p300/CREB-binding protein (p300/CBP), Apoptosis-stimulating protein of p53 (ASPP) and Stress responsive activator of p53 (Strap). This co-activator complex then …
In event of DNA damage, JMY levels also upregulate in the nucleus where JMY forms a co-activator complex with p300/CREB-binding prote …
Fibronectin binding protein B binds to loricrin and promotes corneocyte adhesion by Staphylococcus aureus.
da Costa TM, Viljoen A, Towell AM, Dufrêne YF, Geoghegan JA. da Costa TM, et al. Nat Commun. 2022 May 6;13(1):2517. doi: 10.1038/s41467-022-30271-1. Nat Commun. 2022. PMID: 35523796 Free PMC article.
The first step during skin colonisation is adhesion of the bacteria to corneocytes in the stratum corneum where the cornified envelope protein loricrin is the main ligand for S. aureus. Here we report a novel loricrin-binding protein of S. aureus, the cell wall-anchored fi …
The first step during skin colonisation is adhesion of the bacteria to corneocytes in the stratum corneum where the cornified envelope prote …
DeepBtoD: Improved RNA-binding proteins prediction via integrated deep learning.
Du X, Zhao X, Zhang Y. Du X, et al. J Bioinform Comput Biol. 2022 Aug;20(4):2250006. doi: 10.1142/S0219720022500068. Epub 2022 Apr 21. J Bioinform Comput Biol. 2022. PMID: 35451938
RNA-binding proteins (RBPs) have crucial roles in various cellular processes such as alternative splicing and gene regulation. ...Finally, global information is considered to supplement local modules with ensemble learning to predict whether the target RNA binds to …
RNA-binding proteins (RBPs) have crucial roles in various cellular processes such as alternative splicing and gene regulation. ...Fin …
System-Wide Analysis of the GATC-Binding Nucleoid-Associated Protein Gbn and Its Impact on Streptomyces Development.
Du C, Willemse J, Erkelens AM, Carrion VJ, Dame RT, van Wezel GP. Du C, et al. mSystems. 2022 Jun 28;7(3):e0006122. doi: 10.1128/msystems.00061-22. Epub 2022 May 16. mSystems. 2022. PMID: 35575488 Free PMC article.
DNA binding of Gbn in vitro minimally changes DNA conformation, suggesting a modest role in chromosome organization only, in addition to a gene regulatory role. Transcriptomics analysis showed that Gbn binding generally leads to reduced gene expression. The DNA b …
DNA binding of Gbn in vitro minimally changes DNA conformation, suggesting a modest role in chromosome organization only, in addition …
Identification of beta-amyloid-binding sites on transthyretin.
Du J, Cho PY, Yang DT, Murphy RM. Du J, et al. Protein Eng Des Sel. 2012 Jul;25(7):337-45. doi: 10.1093/protein/gzs026. Epub 2012 Jun 4. Protein Eng Des Sel. 2012. PMID: 22670059 Free PMC article.
Abeta binding was significantly inhibited only in L82A and L110A, indicating that Abeta binding to TTR is mediated through these bulky hydrophobic leucines. Abeta binding to L17A and S85A was significantly higher than to wild-type TTR. ...
Abeta binding was significantly inhibited only in L82A and L110A, indicating that Abeta binding to TTR is mediated through the …
Deciphering the Binding of Salicylic Acid to Arabidopsis thaliana Chloroplastic GAPDH-A1.
Pokotylo I, Hellal D, Bouceba T, Hernandez-Martinez M, Kravets V, Leitao L, Espinasse C, Kleiner I, Ruelland E. Pokotylo I, et al. Int J Mol Sci. 2020 Jun 30;21(13):4678. doi: 10.3390/ijms21134678. Int J Mol Sci. 2020. PMID: 32630078 Free PMC article.
Salicylic acid (SA) has an essential role in the responses of plants to pathogens. SA initiates defence signalling via binding to proteins. NPR1 is a transcriptional co-activator and a key target of SA binding. ...Indeed, mutating GAPA1 Asn35 into Gly or Arg81 into …
Salicylic acid (SA) has an essential role in the responses of plants to pathogens. SA initiates defence signalling via binding to pro …
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