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Year Number of Results
2012 1
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2016 3
2018 2
2019 2
2021 2
2023 4
2024 0

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Page 1
Sequence-structure-function relationships in the microbial protein universe.
Koehler Leman J, Szczerbiak P, Renfrew PD, Gligorijevic V, Berenberg D, Vatanen T, Taylor BC, Chandler C, Janssen S, Pataki A, Carriero N, Fisk I, Xavier RJ, Knight R, Bonneau R, Kosciolek T. Koehler Leman J, et al. Among authors: gligorijevic v. Nat Commun. 2023 Apr 26;14(1):2351. doi: 10.1038/s41467-023-37896-w. Nat Commun. 2023. PMID: 37100781 Free PMC article.
Structure-based protein function prediction using graph convolutional networks.
Gligorijević V, Renfrew PD, Kosciolek T, Leman JK, Berenberg D, Vatanen T, Chandler C, Taylor BC, Fisk IM, Vlamakis H, Xavier RJ, Knight R, Cho K, Bonneau R. Gligorijević V, et al. Nat Commun. 2021 May 26;12(1):3168. doi: 10.1038/s41467-021-23303-9. Nat Commun. 2021. PMID: 34039967 Free PMC article.
Protein remote homology detection and structural alignment using deep learning.
Hamamsy T, Morton JT, Blackwell R, Berenberg D, Carriero N, Gligorijevic V, Strauss CEM, Leman JK, Cho K, Bonneau R. Hamamsy T, et al. Among authors: gligorijevic v. Nat Biotechnol. 2023 Sep 7. doi: 10.1038/s41587-023-01917-2. Online ahead of print. Nat Biotechnol. 2023. PMID: 37679542
Non-Negative Matrix Factorizations for Multiplex Network Analysis.
Gligorijevic V, Panagakis Y, Zafeiriou S. Gligorijevic V, et al. IEEE Trans Pattern Anal Mach Intell. 2019 Apr;41(4):928-940. doi: 10.1109/TPAMI.2018.2821146. Epub 2018 Apr 4. IEEE Trans Pattern Anal Mach Intell. 2019. PMID: 29993651 Free article.
Fuse: multiple network alignment via data fusion.
Gligorijević V, Malod-Dognin N, Pržulj N. Gligorijević V, et al. Bioinformatics. 2016 Apr 15;32(8):1195-203. doi: 10.1093/bioinformatics/btv731. Epub 2015 Dec 14. Bioinformatics. 2016. PMID: 26668003 Free article.
17 results