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On the Hardness of Sequence Alignment on De Bruijn Graphs.
Gibney D, Thankachan SV, Aluru S. Gibney D, et al. Among authors: thankachan sv. J Comput Biol. 2022 Dec;29(12):1377-1396. doi: 10.1089/cmb.2022.0411. Epub 2022 Nov 25. J Comput Biol. 2022. PMID: 36450127
Efficient detection of viral transmissions with Next-Generation Sequencing data.
Rytsareva I, Campo DS, Zheng Y, Sims S, Thankachan SV, Tetik C, Chirag J, Chockalingam SP, Sue A, Aluru S, Khudyakov Y. Rytsareva I, et al. Among authors: thankachan sv. BMC Genomics. 2017 May 24;18(Suppl 4):372. doi: 10.1186/s12864-017-3732-4. BMC Genomics. 2017. PMID: 28589864 Free PMC article.