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SBML2HYB: a Python interface for SBML compatible hybrid modeling.
Pinto J, Costa RS, Alexandre L, Ramos J, Oliveira R. Pinto J, et al. Among authors: costa rs. Bioinformatics. 2023 Jan 1;39(1):btad044. doi: 10.1093/bioinformatics/btad044. Bioinformatics. 2023. PMID: 36661327 Free PMC article.
Modeling formalisms in Systems Biology.
Machado D, Costa RS, Rocha M, Ferreira EC, Tidor B, Rocha I. Machado D, et al. Among authors: costa rs. AMB Express. 2011 Dec 5;1:45. doi: 10.1186/2191-0855-1-45. AMB Express. 2011. PMID: 22141422 Free PMC article.
Toward Community Standards and Software for Whole-Cell Modeling.
Waltemath D, Karr JR, Bergmann FT, Chelliah V, Hucka M, Krantz M, Liebermeister W, Mendes P, Myers CJ, Pir P, Alaybeyoglu B, Aranganathan NK, Baghalian K, Bittig AT, Burke PE, Cantarelli M, Chew YH, Costa RS, Cursons J, Czauderna T, Goldberg AP, Gomez HF, Hahn J, Hameri T, Gardiol DF, Kazakiewicz D, Kiselev I, Knight-Schrijver V, Knupfer C, Konig M, Lee D, Lloret-Villas A, Mandrik N, Medley JK, Moreau B, Naderi-Meshkin H, Palaniappan SK, Priego-Espinosa D, Scharm M, Sharma M, Smallbone K, Stanford NJ, Song JH, Theile T, Tokic M, Tomar N, Toure V, Uhlendorf J, Varusai TM, Watanabe LH, Wendland F, Wolfien M, Yurkovich JT, Zhu Y, Zardilis A, Zhukova A, Schreiber F. Waltemath D, et al. Among authors: costa rs. IEEE Trans Biomed Eng. 2016 Oct;63(10):2007-14. doi: 10.1109/TBME.2016.2560762. Epub 2016 Jun 10. IEEE Trans Biomed Eng. 2016. PMID: 27305665 Free PMC article.
27 results