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MeDuSa: a multi-draft based scaffolder.
Bosi E, Donati B, Galardini M, Brunetti S, Sagot MF, Lió P, Crescenzi P, Fani R, Fondi M. Bosi E, et al. Among authors: crescenzi p. Bioinformatics. 2015 Aug 1;31(15):2443-51. doi: 10.1093/bioinformatics/btv171. Epub 2015 Mar 25. Bioinformatics. 2015. PMID: 25810435
EUCALYPT: efficient tree reconciliation enumerator.
Donati B, Baudet C, Sinaimeri B, Crescenzi P, Sagot MF. Donati B, et al. Among authors: crescenzi p. Algorithms Mol Biol. 2015 Jan 23;10(1):3. doi: 10.1186/s13015-014-0031-3. eCollection 2015. Algorithms Mol Biol. 2015. PMID: 25648467 Free PMC article.
Telling metabolic stories to explore metabolomics data: a case study on the yeast response to cadmium exposure.
Milreu PV, Klein CC, Cottret L, Acuña V, Birmelé E, Borassi M, Junot C, Marchetti-Spaccamela A, Marino A, Stougie L, Jourdan F, Crescenzi P, Lacroix V, Sagot MF. Milreu PV, et al. Among authors: crescenzi p. Bioinformatics. 2014 Jan 1;30(1):61-70. doi: 10.1093/bioinformatics/btt597. Epub 2013 Oct 27. Bioinformatics. 2014. PMID: 24167155 Free PMC article.