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Biomarkers of nanomaterials hazard from multi-layer data.
Fortino V, Kinaret PAS, Fratello M, Serra A, Saarimäki LA, Gallud A, Gupta G, Vales G, Correia M, Rasool O, Ytterberg J, Monopoli M, Skoog T, Ritchie P, Moya S, Vázquez-Campos S, Handy R, Grafström R, Tran L, Zubarev R, Lahesmaa R, Dawson K, Loeschner K, Larsen EH, Krombach F, Norppa H, Kere J, Savolainen K, Alenius H, Fadeel B, Greco D. Fortino V, et al. Among authors: kinaret pas. Nat Commun. 2022 Jul 1;13(1):3798. doi: 10.1038/s41467-022-31609-5. Nat Commun. 2022. PMID: 35778420 Free PMC article.
INfORM: Inference of NetwOrk Response Modules.
Marwah VS, Kinaret PAS, Serra A, Scala G, Lauerma A, Fortino V, Greco D. Marwah VS, et al. Among authors: kinaret pas. Bioinformatics. 2018 Jun 15;34(12):2136-2138. doi: 10.1093/bioinformatics/bty063. Bioinformatics. 2018. PMID: 29425308 Free PMC article.
Transcriptomics in Toxicogenomics, Part III: Data Modelling for Risk Assessment.
Serra A, Fratello M, Cattelani L, Liampa I, Melagraki G, Kohonen P, Nymark P, Federico A, Kinaret PAS, Jagiello K, Ha MK, Choi JS, Sanabria N, Gulumian M, Puzyn T, Yoon TH, Sarimveis H, Grafström R, Afantitis A, Greco D. Serra A, et al. Among authors: kinaret pas. Nanomaterials (Basel). 2020 Apr 8;10(4):708. doi: 10.3390/nano10040708. Nanomaterials (Basel). 2020. PMID: 32276469 Free PMC article. Review.
Transcriptomics in Toxicogenomics, Part I: Experimental Design, Technologies, Publicly Available Data, and Regulatory Aspects.
Kinaret PAS, Serra A, Federico A, Kohonen P, Nymark P, Liampa I, Ha MK, Choi JS, Jagiello K, Sanabria N, Melagraki G, Cattelani L, Fratello M, Sarimveis H, Afantitis A, Yoon TH, Gulumian M, Grafström R, Puzyn T, Greco D. Kinaret PAS, et al. Nanomaterials (Basel). 2020 Apr 15;10(4):750. doi: 10.3390/nano10040750. Nanomaterials (Basel). 2020. PMID: 32326418 Free PMC article. Review.
Transcriptomics in Toxicogenomics, Part II: Preprocessing and Differential Expression Analysis for High Quality Data.
Federico A, Serra A, Ha MK, Kohonen P, Choi JS, Liampa I, Nymark P, Sanabria N, Cattelani L, Fratello M, Kinaret PAS, Jagiello K, Puzyn T, Melagraki G, Gulumian M, Afantitis A, Sarimveis H, Yoon TH, Grafström R, Greco D. Federico A, et al. Among authors: kinaret pas. Nanomaterials (Basel). 2020 May 8;10(5):903. doi: 10.3390/nano10050903. Nanomaterials (Basel). 2020. PMID: 32397130 Free PMC article. Review.
NanoSolveIT Project: Driving nanoinformatics research to develop innovative and integrated tools for in silico nanosafety assessment.
Afantitis A, Melagraki G, Isigonis P, Tsoumanis A, Varsou DD, Valsami-Jones E, Papadiamantis A, Ellis LA, Sarimveis H, Doganis P, Karatzas P, Tsiros P, Liampa I, Lobaskin V, Greco D, Serra A, Kinaret PAS, Saarimäki LA, Grafström R, Kohonen P, Nymark P, Willighagen E, Puzyn T, Rybinska-Fryca A, Lyubartsev A, Alstrup Jensen K, Brandenburg JG, Lofts S, Svendsen C, Harrison S, Maier D, Tamm K, Jänes J, Sikk L, Dusinska M, Longhin E, Rundén-Pran E, Mariussen E, El Yamani N, Unger W, Radnik J, Tropsha A, Cohen Y, Leszczynski J, Ogilvie Hendren C, Wiesner M, Winkler D, Suzuki N, Yoon TH, Choi JS, Sanabria N, Gulumian M, Lynch I. Afantitis A, et al. Among authors: kinaret pas. Comput Struct Biotechnol J. 2020 Mar 7;18:583-602. doi: 10.1016/j.csbj.2020.02.023. eCollection 2020. Comput Struct Biotechnol J. 2020. PMID: 32226594 Free PMC article. Review.
Nextcast: A software suite to analyse and model toxicogenomics data.
Serra A, Saarimäki LA, Pavel A, Del Giudice G, Fratello M, Cattelani L, Federico A, Laurino O, Marwah VS, Fortino V, Scala G, Sofia Kinaret PA, Greco D. Serra A, et al. Among authors: sofia kinaret pa. Comput Struct Biotechnol J. 2022 Mar 18;20:1413-1426. doi: 10.1016/j.csbj.2022.03.014. eCollection 2022. Comput Struct Biotechnol J. 2022. PMID: 35386103 Free PMC article.
13 results