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Page 1
AttentionSiteDTI: an interpretable graph-based model for drug-target interaction prediction using NLP sentence-level relation classification.
Brief Bioinform. 2022 Jul 18;23(4):bbac272. doi: 10.1093/bib/bbac272.
Brief Bioinform. 2022.
PMID: 35817396
Free PMC article.
BindingSite-AugmentedDTA: enabling a next-generation pipeline for interpretable prediction models in drug repurposing.
Yousefi N, Yazdani-Jahromi M, Tayebi A, Kolanthai E, Neal CJ, Banerjee T, Gosai A, Balasubramanian G, Seal S, Ozmen Garibay O.
Yousefi N, et al. Among authors: ozmen garibay o.
Brief Bioinform. 2023 May 19;24(3):bbad136. doi: 10.1093/bib/bbad136.
Brief Bioinform. 2023.
PMID: 37096593
Free PMC article.
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UnbiasedDTI: Mitigating Real-World Bias of Drug-Target Interaction Prediction by Using Deep Ensemble-Balanced Learning.
Tayebi A, Yousefi N, Yazdani-Jahromi M, Kolanthai E, Neal CJ, Seal S, Garibay OO.
Tayebi A, et al. Among authors: garibay oo.
Molecules. 2022 May 6;27(9):2980. doi: 10.3390/molecules27092980.
Molecules. 2022.
PMID: 35566330
Free PMC article.
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Quantum Contagion: A Quantum-Like Approach for the Analysis of Social Contagion Dynamics with Heterogeneous Adoption Thresholds.
Mutlu EC, Ozmen Garibay O.
Mutlu EC, et al. Among authors: ozmen garibay o.
Entropy (Basel). 2021 Apr 27;23(5):538. doi: 10.3390/e23050538.
Entropy (Basel). 2021.
PMID: 33925741
Free PMC article.
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Examining sialic acid derivatives as potential inhibitors of SARS-CoV-2 spike protein receptor binding domain.
Banerjee T, Gosai A, Yousefi N, Garibay OO, Seal S, Balasubramanian G.
Banerjee T, et al. Among authors: garibay oo.
J Biomol Struct Dyn. 2023 Jul 9:1-17. doi: 10.1080/07391102.2023.2234044. Online ahead of print.
J Biomol Struct Dyn. 2023.
PMID: 37424217
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