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Year | Number of Results |
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2013 | 1 |
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Page 1
Discovery of widespread transcription initiation at microsatellites predictable by sequence-based deep neural network.
Nat Commun. 2021 Jun 2;12(1):3297. doi: 10.1038/s41467-021-23143-7.
Nat Commun. 2021.
PMID: 34078885
Free PMC article.
Author Correction: Discovery of widespread transcription initiation at microsatellites predictable by sequence-based deep neural network.
Grapotte M, Saraswat M, Bessière C, Menichelli C, Ramilowski JA, Severin J, Hayashizaki Y, Itoh M, Tagami M, Murata M, Kojima-Ishiyama M, Noma S, Noguchi S, Kasukawa T, Hasegawa A, Suzuki H, Nishiyori-Sueki H, Frith MC; FANTOM consortium; Chatelain C, Carninci P, de Hoon MJL, Wasserman WW, Bréhélin L, Lecellier CH.
Grapotte M, et al.
Nat Commun. 2022 Mar 1;13(1):1200. doi: 10.1038/s41467-022-28758-y.
Nat Commun. 2022.
PMID: 35232988
Free PMC article.
No abstract available.
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High GC content causes orphan proteins to be intrinsically disordered.
Basile W, Sachenkova O, Light S, Elofsson A.
Basile W, et al. Among authors: sachenkova o.
PLoS Comput Biol. 2017 Mar 29;13(3):e1005375. doi: 10.1371/journal.pcbi.1005375. eCollection 2017 Mar.
PLoS Comput Biol. 2017.
PMID: 28355220
Free PMC article.
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Protein expansion is primarily due to indels in intrinsically disordered regions.
Light S, Sagit R, Sachenkova O, Ekman D, Elofsson A.
Light S, et al. Among authors: sachenkova o.
Mol Biol Evol. 2013 Dec;30(12):2645-53. doi: 10.1093/molbev/mst157. Epub 2013 Sep 12.
Mol Biol Evol. 2013.
PMID: 24037790
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A New Census of Protein Tandem Repeats and Their Relationship with Intrinsic Disorder.
Delucchi M, Schaper E, Sachenkova O, Elofsson A, Anisimova M.
Delucchi M, et al. Among authors: sachenkova o.
Genes (Basel). 2020 Apr 9;11(4):407. doi: 10.3390/genes11040407.
Genes (Basel). 2020.
PMID: 32283633
Free PMC article.
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A simple metric of promoter architecture robustly predicts expression breadth of human genes suggesting that most transcription factors are positive regulators.
Hurst LD, Sachenkova O, Daub C, Forrest AR, Huminiecki L; FANTOM consortium.
Hurst LD, et al. Among authors: sachenkova o.
Genome Biol. 2014 Jul 31;15(7):413. doi: 10.1186/s13059-014-0413-3.
Genome Biol. 2014.
PMID: 25079787
Free PMC article.
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